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BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing centre for genomics and bioinformatics research. NOTE 01/2019: FTP now closed. Cited data available:


  1. abyss Public

    🔬 Assemble large genomes using short reads

    C++ 241 95

  2. biobloom Public

    Create Bloom filters for a given reference and then use it to categorize sequences

    C++ 65 14

  3. arcs Public

    🌈Scaffold genome sequence assemblies using linked read sequencing data

    C++ 77 13

  4. ntHash Public

    Fast hash function for DNA sequences

    C++ 66 11

  5. ntCard Public

    Estimating k-mer coverage histogram of genomics data

    C++ 71 10

  6. RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 46 5