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[ADAM-2143] Use fold instead of reduce when loading SAM/BAM/CRAM headers #2144

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merged 1 commit into from
May 1, 2019
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[ADAM-2143] Use fold instead of reduce when loading SAM/BAM/CRAM headers #2144

merged 1 commit into from
May 1, 2019

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fnothaft
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Resolves #2143.

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Coverage Status

Coverage remained the same at 78.921% when pulling 1fce868 on fnothaft:issues/2143-reduce-bad-bam into 6e6ac8d on bigdatagenomics:master.

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Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/2976/
Test PASSed.

@heuermh heuermh added this to the 0.27.0 milestone May 1, 2019
@heuermh heuermh merged commit e8ff4b2 into bigdatagenomics:master May 1, 2019
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heuermh commented May 1, 2019

Thank you, @fnothaft

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@heuermh heuermh heuermh approved these changes

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Successfully merging this pull request may close these issues.

Can encounter empty reduce when BAM header fails validation
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@fnothaft @coveralls @AmplabJenkins @heuermh