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Releases: bioasp/seed2lp

v2.1.1 - Minor bug fixes

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@Chabname Chabname released this 12 Aug 13:10
188f203

This release fixes several bugs causing crashes or incorrect results.

  • Fixed a crash when running without a time limit set
  • Fixed cases where the tool wrongly reported "no solution" for networks with transport-only metabolites
  • Fixed a crash when the solver returned empty or incomplete output
  • Fixed an argument error affecting the seed detection option
  • Metabolites needed for biomass production are now correctly proposed as possible seeds, even when their only producer was removed during network cleanup
  • seed2lp now gives a clear, actionable error message when the input SBML file predates version 3.x or lacks the Flux Balance Constraints (FBC) package, instead of crashing (#3)
  • Fixed an issue where rewriting an SBML file (network command) could produce an invalid file when the source network contained notes or group annotations

Thanks to @csaintmartin for reporting #3.