Grow your team on GitHub
GitHub is home to over 28 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.Sign up
C++ Implementation of EMASE
Preprocess bam file into a compressed alignment incidence matrix (equivalence class)
A set of tools for quantitation of allele-specific expression from scRNA-Seq data
small R utility for mediation analysis
A python toolkit for building and querying multi-string BWTs
Custom genome creation and coordinate conversion
A how-to guide to the Churchill Lab, The Jackson Laboratory, and Bar Harbor.
Expectation-Maximization algorithm for Allele-Specific Expression
Genotype-free genome reconstruction and ASE quantification
Simple API into Ensembl
R code to share among the group.
Code for the Attie lab metabolite and lipid data
Export kallisto pseudo-alignments in a sparse binary matrix format
Source for a paper "The Aging Proteome: Is Aging Programmed in our Genes?"
Convert BAM and SAM files to binary format with Equivalence Classes
Short Course on Systems Genetics 2015
Xingyao Chen's work with the DO, summer 2016
21st Century Mouse Genetics
DOQTL tutorial for IBANGS 2016