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sync with main while working on prov branch

mr-c and others added 9 commits April 20, 2024 20:31
macos-lates is now an Apple Silicon M1, for which seqtk is not yet built on bioconda
* Replace .decode method with str(bytes, "utf-8")

This is because some bytes-like objects (such as memoryview) don't
have a "decode()" method.  It appears that the preferred way to get a
decoded string is to simply call the constructor with the bytes-like
object and the desired encoding.
Updates the requirements on [pytest](https://github.com/pytest-dev/pytest) to permit the latest version.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@6.2.0...8.2.0)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [mypy](https://github.com/python/mypy) from 1.9.0 to 1.10.0.
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@1.9.0...v1.10.0)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Updates the requirements on [black](https://github.com/psf/black) to permit the latest version.
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](psf/black@24.3.0...24.4.0)

---
updated-dependencies:
- dependency-name: black
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
@ElderMedic ElderMedic self-assigned this May 23, 2024
@ElderMedic ElderMedic merged commit 0f7df3c into prov_data_input_output May 23, 2024
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5 participants