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GenomeSpy for Python 0.9.0

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@okunator okunator released this 04 Nov 18:29
· 2 commits to main since this release
v0.9.0
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GenomeSpy for Python 0.9.0 upgrades the bundled renderer and generated grammar to GenomeSpy Core 1.3.0.

New authoring support

  • Figwig lazy data sources, branch and values transforms, category and interactive legend selections, categorical grouping and zooming, dendrogram domain outputs, and rule fills and borders.
  • Generated public schema-class exports alongside the existing Python builders. New schema features are discovered by the generator rather than added individually by hand.

Fixes and compatibility

  • Adopt upstream fixes for shared hover, categorical-domain updates and multi-column legends.
  • Preserve nested branch transforms and container union annotations in generated APIs.
  • Reuse checked schema setup to speed repeated serialization while retaining validation of every instance and changed custom schemas.
  • Empty ungrouped aggregates now emit zero-valued rows; selection projection follows the expanded Core grammar.
  • Retain v0.8.1's native notebook sizing fixes. Straight-link SVG exports, zero-height dendrogram viewports and exact brush-boundary matching remain known upstream limitations. Additional Scanpy integration workflows using the new capabilities remain separate work.
pip install --upgrade genome-spy-python

Documentation · Full changelog

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