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AlphaGenome 2 model API (alphagenome.models.v2), supporting
reference-condition and single-cell expression-conditioned predictions,
variant and interval scoring, cell embeddings, and input gradients.
GeneExpressionData container for gene-level expression predictions.
Enhancer-to-gene scoring and calling utilities
(alphagenome.interpretation.enhancer_scoring).
GeneExpression, OverlaidGeneExpression, and EnhancerArcs plot
components.
filter_to_observed helper on TrackData and JunctionData.
Tutorials, vignettes, and user guides for AlphaGenome 2.
Removed
Deprecated alphagenome.models.* v1 aliases; import from alphagenome.models.v1 instead.