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Easily launch your own cloud servers for use with Galaxy and CloudMan
A keycloak theme for the GVL
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission
A helm chart for the Genomics Virtual Lab
An Ansible role for managing a Galaxy (http://galaxyproject.org) server.
Scripts for users of GVL cloud instances. These scripts configure GVL servers as command line bioinformatics platforms.
A Python client for the GenomeSpace API
Library for managing Galaxy plugins - tools, index data, and workflows.
A collection of training material from offered Galaxy courses
Some DeVL/GVL tools for Galaxy.
Playbook for building the Genomics Virtual Laboratory
An Ansible role for installing and configuring CernVM-FS (CVMFS)
Ansible role for the Genomics Virtual Lab filesystem
Data intensive biology for everyone.
Conda recipes for the bioconda channel.
A miscellaneous assortment of administrative utilities for the GVL
An Ansible role for automated installation of tools from a Tool Shed into Galaxy.
This role is used to setup Galaxy for use with CloudMan.
An Ansible role for setting up PostgreSQL database for use with Galaxy CloudMan.
An Ansible role for building a machine image for CloudMan.
An Ansible role for managing a Pulsar (https://github.com/galaxyproject/pulsar) server.
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
GVL website content in markdown format
An ansible role required by the gvl.ansible.filesystem role.
Ansible role for building the GVL machine image.
Ansible script to install the PHAC's IRIDA project into the GVL.
Ansible to install Web Apollo in a GVL instance
Ansible scripts for setting up the smrt analysis portal on a GVL
This ansible playbook is executed by the GVL to install the BWA-Mem workflow from the ICGC PanCancer Analysis of Whole Genomes (PCAWG) project.