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@holehouse-lab

Holehouse Lab

Main GitHub repo for the Holehouse lab - see our IDP-sequence-centric repo https://github.com/idptools

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  1. soursop soursop Public

    soursop is an analysis suite for all-atom simulations of disordered proteins. NOTE soursop used to be called camparitraj...

    Python 9 4

  2. shephard shephard Public

    Sequence-based Hierarchical and Extendable Platform for High-throughput Analysis of Region of Disorder

    Python 6 1

  3. supportingdata supportingdata Public

    A general repository for additional supporting data for manuscripts published from the Holehouse lab

    Jupyter Notebook 5 3

  4. ALBATROSS-colab ALBATROSS-colab Public

    Repository used with Google Colab notebooks for our IDR ensemble dimension predictors.

    Jupyter Notebook 3

  5. bib2coa bib2coa Public

    Simple tool to convert a bibtex file to the start of an NSF-compliant COA file

    Python 2

  6. shephard-colab shephard-colab Public

    Repository used with Google Colab notebooks for SHEPHARD. Should be kept lightweight as will be cloned.

    Jupyter Notebook 2

Repositories

Showing 10 of 11 repositories
  • soursop Public

    soursop is an analysis suite for all-atom simulations of disordered proteins. NOTE soursop used to be called camparitraj...

    holehouse-lab/soursop’s past year of commit activity
    Python 9 LGPL-3.0 4 0 0 Updated Jul 13, 2024
  • supportingdata Public

    A general repository for additional supporting data for manuscripts published from the Holehouse lab

    holehouse-lab/supportingdata’s past year of commit activity
    Jupyter Notebook 5 3 0 0 Updated Jul 5, 2024
  • idpseminars.github.io Public Forked from academicpages/academicpages.github.io

    Github Pages for IDPSeminars website

    holehouse-lab/idpseminars.github.io’s past year of commit activity
    JavaScript 0 MIT 40,346 0 0 Updated Jun 5, 2024
  • shephard Public

    Sequence-based Hierarchical and Extendable Platform for High-throughput Analysis of Region of Disorder

    holehouse-lab/shephard’s past year of commit activity
    Python 6 LGPL-3.0 1 0 0 Updated May 11, 2024
  • shephard-data Public

    A repository for sharing SHEPHARD-formatted data. This repo contains only data, information on how it was obtained, and a clear protocol the resulting data cleaning protocols used.

    holehouse-lab/shephard-data’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated May 7, 2024
  • ALBATROSS-colab Public

    Repository used with Google Colab notebooks for our IDR ensemble dimension predictors.

    holehouse-lab/ALBATROSS-colab’s past year of commit activity
    Jupyter Notebook 3 MIT 0 1 0 Updated Feb 4, 2024
  • protfasta Public

    Simple but robust parser for protein-based FASTA files

    holehouse-lab/protfasta’s past year of commit activity
    Python 1 MIT 2 1 0 Updated Jan 5, 2024
  • shephard-colab Public

    Repository used with Google Colab notebooks for SHEPHARD. Should be kept lightweight as will be cloned.

    holehouse-lab/shephard-colab’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Oct 13, 2023
  • disorderedsensors Public
    holehouse-lab/disorderedsensors’s past year of commit activity
    0 MIT 0 0 0 Updated Jun 7, 2022
  • bib2coa Public

    Simple tool to convert a bibtex file to the start of an NSF-compliant COA file

    holehouse-lab/bib2coa’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Mar 10, 2021
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