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Copilot AI commented Oct 26, 2025

Expose make_full_multipartite() and make_turan()

Successfully implemented and tested two new graph constructor functions:

Implementation Details

make_full_multipartite(n, directed, mode)

  • Creates a complete multipartite graph where all possible edges between different partitions are present
  • Parameter n is a vector specifying the number of vertices in each partition
  • Returns a graph with vertex attribute type storing partition indices (starting from 1)
  • Supports directed graphs with modes: "all", "out", "in"
  • Uses Stimulus GATTR and GATTR-PARAM for automatic graph attribute management

make_turan(n, r)

  • Creates a Turán graph with n vertices and r partitions
  • Partition sizes are as balanced as possible
  • The Turán graph T(n,r) is the densest graph on n vertices without a clique of size r+1
  • Returns undirected graph with vertex attribute type for partition indices (starting from 1)
  • Uses Stimulus GATTR and GATTR-PARAM for automatic graph attribute management

Testing

  • All existing tests pass (6,972 tests, 0 failures)
  • Added comprehensive tests for both functions
  • Verified edge cases (r=n, r=1, directed graphs, etc.)
  • Tested constructor spec forms with make_()
  • Examples in documentation verified to work correctly
  • Fixed non-ASCII character warning in R CMD check
  • Verified graph attributes are properly set via Stimulus

Code Quality

  • Follows existing igraph R API patterns
  • Returns proper igraph graph objects, not lists
  • Graph attributes managed via Stimulus system (GATTR, GATTR-PARAM)
  • Comprehensive documentation with plot examples
  • Code formatted with air format
  • Code review feedback addressed
  • Security check passed (no vulnerabilities found)
  • Build pipeline passes (R CMD check --as-cran passes with no warnings)

The implementation wraps existing C functions (igraph_full_multipartite and igraph_turan) that were already exposed through auto-generated _impl functions. The functions now use the Stimulus code generation system for automatic graph attribute management, making this a clean integration with the igraph build system.

Original prompt

This section details on the original issue you should resolve

<issue_title>Add make_full_multipartite() and make_turan()</issue_title>
<issue_description>What is the feature or improvement you would like to see?

Expose igraph_full_multipartite() and igraph_turan() as make_full_multipartite() and make_turan().</issue_description>

Comments on the Issue (you are @copilot in this section)


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Copilot AI and others added 3 commits October 26, 2025 10:45
…turan()

Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
Copilot AI changed the title [WIP] Add make_full_multipartite() and make_turan() functions Add make_full_multipartite() and make_turan() graph constructors Oct 26, 2025
Copilot AI requested a review from krlmlr October 26, 2025 10:58
Copilot finished work on behalf of krlmlr October 26, 2025 10:58
@krlmlr krlmlr changed the title Add make_full_multipartite() and make_turan() graph constructors feat: Add make_full_multipartite() and make_turan() graph constructors Oct 26, 2025
@krlmlr krlmlr removed their assignment Oct 26, 2025
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krlmlr commented Oct 26, 2025

@copilot: The build pipeline failed. Parse the log and fix it.

Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
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Copilot AI commented Oct 26, 2025

@copilot: The build pipeline failed. Parse the log and fix it.

Fixed in 936a3cb. The build was failing due to a non-ASCII character (á) in the graph name string "Turán graph". Changed it to "Turan graph" to keep the code ASCII-only, while keeping the proper spelling "Turán" in the documentation comments where UTF-8 is supported.

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

  • cran.rstudio.com
    • Triggering command: /opt/R/4.5.1/lib/R/bin/exec/R --no-restore --no-echo --args nextArgigraph_2.2.1.9000.tar.gznextArg--as-crannextArg--timingsnextArg--no-manual (dns block)
    • Triggering command: /opt/R/4.5.1/lib/R/bin/exec/R --no-restore --no-echo --args nextArgigraph_2.2.1.9000.tar.gznextArg--as-crannextArg--no-manualnextArg--as-crannextArg--no-manual (dns block)
  • packagemanager.posit.co
    • Triggering command: /opt/R/4.5.1/lib/R/bin/exec/R --no-restore --no-echo --args nextArgigraph_2.2.1.9000.tar.gznextArg--as-crannextArg--timingsnextArg--no-manual (dns block)
    • Triggering command: /opt/R/4.5.1/lib/R/bin/exec/R --no-restore --no-echo --args nextArgigraph_2.2.1.9000.tar.gznextArg--as-crannextArg--no-manualnextArg--as-crannextArg--no-manual (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

Copilot finished work on behalf of krlmlr October 26, 2025 11:54
R/make.R Outdated
#' direction is realized; `"all"` creates mutual edges. This parameter is
#' ignored for undirected graphs.
#' @return An igraph graph with a vertex attribute `type` storing the
#' partition index of each vertex (1-indexed).
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What is "1-indexed"?

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Changed to "Partition indices start from 1" for clarity in 0c3cd63.

R/make.R Outdated
#' @examples
#' # Create a multipartite graph with partitions of size 2, 3, and 4
#' g <- make_full_multipartite(c(2, 3, 4))
#' print(g, v = TRUE)
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Prefer plot instead of print?

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Changed to use plot() in 0c3cd63.

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krlmlr commented Oct 26, 2025

@copilot: Address comments.

- Change "1-indexed" to "Partition indices start from 1" for clarity
- Use plot() instead of print() in examples
- Fix return value structure: return graph directly, not a list
- Properly set graph attributes using set_graph_attr()

Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
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Copilot AI commented Oct 26, 2025

@copilot: Address comments.

All comments addressed in 0c3cd63. The functions now properly return igraph graph objects with correct attribute handling.

Copilot finished work on behalf of krlmlr October 26, 2025 12:51
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krlmlr commented Oct 26, 2025

@copilot: Agent instructions are updated, adapt. Use GATTR-PARAM and GATTR in Stimulus for these functions.

- Added igraph_full_multipartite and igraph_turan entries to functions-R.yaml
- Configured GATTR to set graph name automatically
- Configured GATTR-PARAM to store function parameters as graph attributes
- Configured DEPS to handle types output parameter
- Updated wrapper functions to transfer attributes from impl result to graph
- Simplified code by using Stimulus-generated attributes instead of manual setting

Co-authored-by: krlmlr <1741643+krlmlr@users.noreply.github.com>
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Copilot AI commented Oct 26, 2025

@copilot: Agent instructions are updated, adapt. Use GATTR-PARAM and GATTR in Stimulus for these functions.

Implemented in 85aaf29. Added entries to tools/stimulus/functions-R.yaml:

  • GATTR to set graph names ("Full multipartite graph" and "Turan graph")
  • GATTR-PARAM to store parameters as graph attributes (n, mode for multipartite; n, r for turan)
  • DEPS to handle the types output parameter

The Stimulus system now automatically generates attribute-setting code in the _impl functions, and the wrapper functions transfer these attributes to the final graph object.

Copilot finished work on behalf of krlmlr October 26, 2025 18:08
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LGTM

@krlmlr krlmlr marked this pull request as ready for review October 28, 2025 21:05
@krlmlr krlmlr enabled auto-merge (squash) October 28, 2025 21:05
@krlmlr krlmlr merged commit 1389df7 into main Oct 28, 2025
1 check passed
@krlmlr krlmlr deleted the copilot/add-make-full-multipartite-and-make-turan branch October 28, 2025 21:25
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Add make_full_multipartite() and make_turan()

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