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v1.0.0
On file inputs, the single-threaded parser is now 1.1-4× faster than needletail, while the new multi-threaded parser is 3-6× faster than paraseq using 4 threads.
Breaking change: parsers now yield Result<Event, parser::Error> (instead of Event), enabling standard ? error propagation.
What's New
- Built-in multi-threaded parser (
ParallelFastxParser) with multiple readers. - Streaming multi-reader BGZF (
.gz) and multi-frame Zstandard (.zst) parallel decompression with constant memory (~2 MB). - Accelerated 2-bit bitpacking (
PackedDNAandColumnarDNA) for contiguous reads and multiline sequences. - AVX-512 vector kernel for 512-bit scanning on supported x86 CPUs.
- Zero-overhead CRLF (
\r\n) line ending support for Windows. reject_non_actgoption, returning anErrorKind::InvalidBaseerror at the first non-ACTG base.swap_dna_packed,swap_dna_columnar,swap_mask_non_actg,swap_mask_nandswap_packed_seq_vecto get the current sequence without allocating and reuse the given buffer.- Calling a
FastxParsergetter disabled by the config (e.g.get_headerwithignore_headers) is now a compile-time error. FastxParserisSend.- Needletail and paraseq migration helpers.