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v0.2.0

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@malteborggrewe malteborggrewe released this 06 Jul 09:04
· 7 commits to main since this release
v0.2.0
836f8ae

Breaking changes

  • Seurat >= 5.0.0 is now required.
  • Migrated from the deprecated slot argument to layer throughout, for compatibility with SeuratObject >= 5.0.0.

Features

  • Added optional TMM normalization to differential_abundance() (tmm_normalisation, default FALSE) to correct for compositional effects.

Improvements

  • Aggregate detection functions now skip unfittable channel pairs with an informative warning instead of failing.
  • Added a testthat unit test suite.

Documentation

  • Updated vignette text and added a cyCombine usage example.
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