Add documentation for detailed presence

inbo · Jan 17, 2022 · 69a250f · 69a250f
1 parent 95ff2c8
commit 69a250f
Show file tree

Hide file tree

Showing 3 changed files with 546 additions and 39 deletions.
diff --git a/docs/advanced_usage.ipynb b/docs/advanced_usage.ipynb
@@ -122,6 +122,37 @@
     "plt.show()"
    ]
   },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "### Create detailed absence/presence plots\n",
+    "\n",
+    "Rather than just showing if a certain vegetation type is present or not present, it is possible to show a more detailed analysis on the reason a vegetation type is present or not present. This follows the the steps of the niche analysis: ie if soil type is possible, mxw checks are done and finally other input grids are matched."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 2,
+   "metadata": {},
+   "outputs": [
+    {
+     "ename": "NameError",
+     "evalue": "name 'full' is not defined",
+     "output_type": "error",
+     "traceback": [
+      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
+      "\u001b[0;31mNameError\u001b[0m                                 Traceback (most recent call last)",
+      "\u001b[0;32m/tmp/ipykernel_112934/1467200067.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0max\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mfull\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mplot\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m7\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      2\u001b[0m \u001b[0max\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mfull\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mplot_detail\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m7\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;31mNameError\u001b[0m: name 'full' is not defined"
+     ]
+    }
+   ],
+   "source": [
+    "ax = full.plot(7)\n",
+    "ax = full.plot_detail(7)"
+   ]
+  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -279,6 +310,11 @@
   }
  ],
  "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",