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output string graph in GFA format #8

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ekg opened this issue Jan 27, 2016 · 2 comments

ekg commented Jan 27, 2016

Would it be straightforward to output the string graph obtained in step 3 of the algorithm in GFA format?

Owner

lh3 commented Jan 27, 2016

Option -p sg. There is also a hidden option -S to control how many graph cleaning steps to apply. See main.c for possible values.

Author

ekg commented Jan 27, 2016

Great! Thanks @lh3

ekg closed this as completed

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