pcl_ros acting up in MacOS 10.12 #64

oceanusxiv · 2016-10-01T04:58:33Z

So I've looked around and saw this problem pop up with El Capitan, but it seems to have been fixed with pcl 1.8. Now it's popping up again. When I try to build pcl_ros I get the error

Starting >>> pcl_ros

Warnings << pcl_ros:cmake /Users/eric1221bday/indigo_desktop_full_ws/logs/pcl_ros/build.cmake.000.log
** WARNING ** io features related to openni will be disabled
** WARNING ** io features related to openni2 will be disabled
** WARNING ** io features related to ensenso will be disabled
** WARNING ** io features related to davidSDK will be disabled
** WARNING ** io features related to dssdk will be disabled
** WARNING ** io features related to pcap will be disabled
** WARNING ** io features related to png will be disabled
** WARNING ** io features related to libusb-1.0 will be disabled
** WARNING ** visualization features related to openni will be disabled
** WARNING ** visualization features related to openni2 will be disabled
** WARNING ** visualization features related to ensenso will be disabled
** WARNING ** visualization features related to davidSDK will be disabled
** WARNING ** visualization features related to dssdk will be disabled
** WARNING ** visualization features related to rssdk will be disabled
** WARNING ** apps features related to openni will be disabled
CMake Warning at /opt/ros/indigo/share/catkin/cmake/test/nosetests.cmake:98 (message):
nosetests not found, Python tests can not be run (try installing package
'python-nose')
Call Stack (most recent call first):
/opt/ros/indigo/share/catkin/cmake/all.cmake:147 (include)
/opt/ros/indigo/share/catkin/cmake/catkinConfig.cmake:51 (include)
CMakeLists.txt:11 (find_package)

CMake Warning (dev) at CMakeLists.txt:80 (add_dependencies):
Policy CMP0046 is not set: Error on non-existent dependency in
add_dependencies. Run "cmake --help-policy CMP0046" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.

The dependency target "pcl_ros_generate_messages_cpp" of target
"pcl_ros_tf" does not exist.
This warning is for project developers. Use -Wno-dev to suppress it.

cd /Users/eric1221bday/indigo_desktop_full_ws/build/pcl_ros; catkin build --get-env pcl_ros | catkin env -si /usr/local/bin/cmake /Users/eric1221bday/indigo_desktop_full_ws/src/perception_pcl/pcl_ros --no-warn-unused-cli -DCATKIN_DEVEL_PREFIX=/Users/eric1221bday/indigo_desktop_full_ws/devel/.private/pcl_ros -DCMAKE_INSTALL_PREFIX=/opt/ros/indigo -DCATKIN_ENABLE_TESTING=1 -DCMAKE_BUILD_TYPE=Release -DPYTHON_LIBRARY=/usr/local/Cellar/python/2.7.12/Frameworks/Python.framework/Versions/2.7/lib/libpython2.7.dylib -DPYTHON_INCLUDE_DIR=/usr/local/Cellar/python/2.7.12/Frameworks/Python.framework/Versions/2.7/include/python2.7; cd -
....................................................................................................................................................................................

Errors << pcl_ros:make /Users/eric1221bday/indigo_desktop_full_ws/logs/pcl_ros/build.make.000.log
ld: library not found for -lpcl_io
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [/Users/eric1221bday/indigo_desktop_full_ws/devel/.private/pcl_ros/lib/pcl_ros/pointcloud_to_pcd] Error 1
make[1]: *** [CMakeFiles/pointcloud_to_pcd.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
ld: library not found for -lpcl_io
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [/Users/eric1221bday/indigo_desktop_full_ws/devel/.private/pcl_ros/lib/pcl_ros/convert_pointcloud_to_image] Error 1
make[1]: *** [CMakeFiles/convert_pointcloud_to_image.dir/all] Error 2
ld: library not found for -lpcl_io
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [/Users/eric1221bday/indigo_desktop_full_ws/devel/.private/pcl_ros/lib/pcl_ros/pcd_to_pointcloud] Error 1
make[1]: *** [CMakeFiles/pcd_to_pointcloud.dir/all] Error 2
make: *** [all] Error 2

spmaniato · 2016-11-19T04:37:16Z

I'm getting a new compilation error today (after brew upgrade) and a fresh.rosinstall file:

Errors     << pcl_ros:make /Users/smaniato/Projects/Robotics/indigo_desktop_full_ws/logs/pcl_ros/build.make.000.log
In file included from /Users/smaniato/Projects/Robotics/indigo_desktop_full_ws/src/perception_pcl/pcl_ros/tools/convert_pointcloud_to_image.cpp:42:
In file included from /Users/smaniato/Projects/Robotics/indigo_desktop_full_ws/src/ros_comm/roscpp/include/ros/ros.h:38:
In file included from /Users/smaniato/Projects/Robotics/indigo_desktop_full_ws/src/roscpp_core/rostime/include/ros/time.h:53:
In file included from /Users/smaniato/Projects/Robotics/indigo_desktop_full_ws/src/roscpp_core/cpp_common/include/ros/platform.h:55:
In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/string:436:
/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/cstring:79:9: error: no member named 'strcoll' in the global namespace; did you mean 'strtoll'?
using ::strcoll;
      ~~^

Might be coincidental that it came up during pcl_ros Or maybe not.

PS1. I'm on macOS 10.11 ⚠️
PS2. I also upgraded to Xcode 8 since last time I built ROS

lloydc99 · 2016-11-20T16:38:18Z

I have the same problem in pcl_ros and similar problems in several other projects.

Errors     << image_proc:make /Users/clloyd/ros-install-t2/indigo_desktop_full_ws/logs/image_proc/build.make.004.log   
 In file included from /Users/clloyd/ros-install-t2/indigo_desktop_full_ws/src/image_pipeline/image_proc/src/libimage_proc/processor.cpp:34:
 In file included from /Users/clloyd/ros-install-t2/indigo_desktop_full_ws/src/image_pipeline/image_proc/include/image_proc/processor.h:37:
 In file included from /usr/local/include/opencv2/core/core.hpp:53:
 In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/algorithm:626:
 /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/cstring:79:9: error: no member named 'strcoll' in the global namespace; did you mean 'strtoll'?
using ::strcoll;

Errors     << image_view:make /Users/clloyd/ros-install-t2/indigo_desktop_full_ws/logs/image_view/build.make.004.log   
In file included from /Users/clloyd/ros-install-t2/indigo_desktop_full_ws/src/image_pipeline/image_view/src/nodes/disparity_view.cpp:34:
In file included from /opt/ros/indigo/include/ros/ros.h:38:
In file included from /opt/ros/indigo/include/ros/time.h:53:
In file included from /opt/ros/indigo/include/ros/platform.h:55:
In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/string:436:
/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/cstring:79:9: error: no member named 'strcoll' in the global namespace; did you mean 'strtoll'?
using ::strcoll;

spmaniato · 2016-11-20T16:58:16Z

@lloydc99 What are your macOS and Xcode versions? Also, are you building Indigo or Kinetic?

PS. I'm also getting the no member named '<something>' in the global namespace when compiling other modules as well. Basically I can only build the ros_base configuration without these issues. Maybe we should open a standalone issue about this.

lloydc99 · 2016-11-20T17:01:40Z

Sorry,

Should have included:
macOS 10.12.1
Xcode Version 8.1 (8B62)

I agree this is probably a new and separate issue.

toyoxx · 2016-11-21T02:39:52Z

I had this exact problem, but I had it on common_tutorials first. I headed there and they pointed me that it was a problem in class_loader package. I then moved the thread there but so far no comments or replies. I gave up compiling on Sierra for the time being.

I tried switching from libc++ to libstdc++, and also switching the compilers. None of these worked.

I'll keep trying different approaches and will let you know if I find a way to solve this.

Thanks

lloydc99 · 2016-11-21T02:43:03Z

Thanks for the update.

I'm looking at cmake options based on this very old post.
I have not had a chance to follow it all the way through.

http://forum.openscenegraph.org/viewtopic.php?t=3007&view=previous

On Sun, Nov 20, 2016 at 9:39 PM, toyoxx notifications@github.com wrote:

I had this exact problem, but I had it on common_tutorials first. I headed
there and they pointed me that it was a problem in class_loader package.
I then moved the thread there but so far no comments or replies. I gave up
compiling on Sierra for the time being.

I tried switching from libc++ to libstdc++, and also switching the
compilers. None of these worked.

I'll keep trying different approaches and will let you know if I find a
way to solve this.

Thanks

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spmaniato · 2016-11-21T03:07:32Z

@toyoxx I don't think the macOS version is the problem since I'm on El Capitan (10.11.6) and still getting the same errors. Are you on Xcode 8 too maybe? It looks like the common denominator 🤔

mikepurvis · 2016-11-21T03:56:23Z

Has anyone seen this error while using the command line tools vs. the full XCode install? In the past, there have been cryptic errors that go away when users switch to the CLT compiler.

lloydc99 · 2016-11-21T03:59:17Z

I'm not sure what I should be using. Does this help?
$ xcode-select -p
/Library/Developer/CommandLineTools

On Sun, Nov 20, 2016 at 10:56 PM, Mike Purvis notifications@github.com
wrote:

Has anyone seen this error while using the command line tools vs. the full
XCode install? In the past, there have been cryptic errors that go away
when users switch to the CLT compiler.

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spmaniato · 2016-11-21T04:06:17Z

I was definitely using command line tools before the Xcode 8 upgrade. But even now, I get:

$ gcc --version
Configured with: --prefix=/Library/Developer/CommandLineTools/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 7.3.0 (clang-703.0.31)
Target: x86_64-apple-darwin15.6.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin

@mikepurvis Digging a bit deeper, for me the errors are coming from:

/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/cstring

whereas for @toyoxx (link to his gist) they are coming from:

/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/cstring

PS. If anyone wants to try downgrading Xcode: http://stackoverflow.com/a/14756127/2653356

knorth55 · 2016-12-04T15:56:40Z

I got same error macOS sierra, but I updated Xcode, and build was succeeded.
I think i switched to use xcode command-line-tools (I'm not sure, but my installdir of gcc looks so)

$ gcc --version
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Target: x86_64-apple-darwin16.0.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin

spaghetti- · 2017-01-05T23:55:39Z

No errors on 10.12 with XCode 8 (latest), pcl 1.8. Can this be closed?

mikepurvis · 2017-10-20T19:18:38Z

I'm getting a clean build at least on El Cap, but that's with CMAKE_FIND_FRAMEWORK=LAST added, as suggested in #73.

lloydc99 mentioned this issue Nov 29, 2016

Xcode 8.1 on Sierra 10.12 has multiple "no member XXX in global namespace" errors #73

Closed

mikepurvis closed this as completed Oct 20, 2017

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pcl_ros acting up in MacOS 10.12 #64

pcl_ros acting up in MacOS 10.12 #64

oceanusxiv commented Oct 1, 2016

spmaniato commented Nov 19, 2016 •

edited

lloydc99 commented Nov 20, 2016

spmaniato commented Nov 20, 2016 •

edited

lloydc99 commented Nov 20, 2016

toyoxx commented Nov 21, 2016 •

edited

lloydc99 commented Nov 21, 2016

spmaniato commented Nov 21, 2016

mikepurvis commented Nov 21, 2016

lloydc99 commented Nov 21, 2016

spmaniato commented Nov 21, 2016 •

edited

knorth55 commented Dec 4, 2016

spaghetti- commented Jan 5, 2017

mikepurvis commented Oct 20, 2017

pcl_ros acting up in MacOS 10.12 #64

pcl_ros acting up in MacOS 10.12 #64

Comments

oceanusxiv commented Oct 1, 2016

spmaniato commented Nov 19, 2016 • edited

lloydc99 commented Nov 20, 2016

spmaniato commented Nov 20, 2016 • edited

lloydc99 commented Nov 20, 2016

toyoxx commented Nov 21, 2016 • edited

lloydc99 commented Nov 21, 2016

spmaniato commented Nov 21, 2016

mikepurvis commented Nov 21, 2016

lloydc99 commented Nov 21, 2016

spmaniato commented Nov 21, 2016 • edited

knorth55 commented Dec 4, 2016

spaghetti- commented Jan 5, 2017

mikepurvis commented Oct 20, 2017

spmaniato commented Nov 19, 2016 •

edited

spmaniato commented Nov 20, 2016 •

edited

toyoxx commented Nov 21, 2016 •

edited

spmaniato commented Nov 21, 2016 •

edited