mnelab

JupyterLab Docker Image pre-configured with MNE / Plotly / ipywidgets for interactive EEG analysis.

All the needed JupyterLab extensions are pre-installed so there should be no widget rendering issues.

Usage

Pull the image:

docker pull mohirio/mnelab

And run:

docker run -p 8888:8888 -v "/your/work/directory":/home/jovyan/work mohirio/mnelab

Configuration

This image uses Base Notebook one layer underneath, so it can be used with JupyterHub

Please refer to Jupyter Docker Stacks on ReadTheDocs to find more about configuring the run command.

e.g. to start with classic notebook:

docker run -e JUPYTER_ENABLE_LAB="" -p 8888:8888 mnelab

Installed Packages:

MNE-Python
numpy
matplotlib
Plotly
ipywidgets

JupyterLab extensions:

@jupyter-widgets/jupyterlab-manager
@jupyterlab/plotly-extension
plotlywidget
@mohirio/jupyterlab-horizon-theme