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Add nf-core colors to rtd sphinx theme #926

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Mar 22, 2021
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Add nf-core colors to rtd sphinx theme #926

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00307a3
Add nf-core colors to rtd sphinx theme
Mar 19, 2021
e7dddec
fix for linting
Mar 19, 2021
d058b1a
dummy commit to run the tests one more time 🙂
Mar 19, 2021
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199 changes: 199 additions & 0 deletions docs/api/_src/_static/css/custom.css
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Original file line number Diff line number Diff line change
@@ -0,0 +1,199 @@
@media (prefers-color-scheme: light) {
.wy-nav-side{
background-color: #ededed;
}
.wy-nav-top, .wy-side-nav-search, .wy-menu-vertical a:active {
background-color: #32AD65;
}
.wy-menu-vertical a{
color: #343434;
}
.wy-menu-vertical a:hover{
background-color: #abacab85;
}
.wy-menu-vertical header, .wy-menu-vertical p.caption {
color:#32AD65;
}

.wy-side-nav-search input[type=text]{
border: none;
}

code, .rst-content code.literal{
background-color: rgba(220,220,220,0.4);
color: #db9444;
border: none;
}
.rst-content .note .admonition-title{
background-color: #72757bfc
}

html.writer-html4 .rst-content dl:not(.docutils)>dt, html.writer-html5 .rst-content dl[class]:not(.option-list):not(.field-list):not(.footnote):not(.glossary):not(.simple)>dt {
background-color: #32AD65;
border:none;
}
.rst-content .method>dt>code {
color: #f5f6f7;
}
.sig-paren{
color: #db9444;
}
.rst-content div[class^=highlight], .rst-content pre.literal-block{
border:none;
}
.highlight{
background-color: #242424;
color: #e5e6e7;
}
.highlight .hll{
color: #e5e6e7;
background-color: #585b60fc;
}
.highlight .k, .highlight .nt, .highlight .no{
color: #6fb2e8;
}
.highlight .s, .highlight .s1, .highlight .s2{
color: #32AD65;
}
.highlight .nb, .highlight .o{
color: #db9444;
}
.highlight .c1{
color: #88898afc;
}
.highlight .nv{
color: #f9d977;
}
.btn.btn-neutral {
background-color: #e5e6e7d4 !important;
}
.rst-content .hint .admonition-title, .rst-content .hint .wy-alert-title, .rst-content .important .admonition-title, .rst-content .important .wy-alert-title, .rst-content .tip .admonition-title, .rst-content .tip .wy-alert-title, .rst-content .wy-alert-success.admonition-todo .admonition-title, .rst-content .wy-alert-success.admonition-todo .wy-alert-title, .rst-content .wy-alert-success.admonition .admonition-title, .rst-content .wy-alert-success.admonition .wy-alert-title, .rst-content .wy-alert-success.attention .admonition-title, .rst-content .wy-alert-success.attention .wy-alert-title, .rst-content .wy-alert-success.caution .admonition-title, .rst-content .wy-alert-success.caution .wy-alert-title, .rst-content .wy-alert-success.danger .admonition-title, .rst-content .wy-alert-success.danger .wy-alert-title, .rst-content .wy-alert-success.error .admonition-title, .rst-content .wy-alert-success.error .wy-alert-title, .rst-content .wy-alert-success.note .admonition-title, .rst-content .wy-alert-success.note .wy-alert-title, .rst-content .wy-alert-success.seealso .admonition-title, .rst-content .wy-alert-success.seealso .wy-alert-title, .rst-content .wy-alert-success.warning .admonition-title, .rst-content .wy-alert-success.warning .wy-alert-title, .rst-content .wy-alert.wy-alert-success .admonition-title, .wy-alert.wy-alert-success .rst-content .admonition-title, .wy-alert.wy-alert-success .wy-alert-title{
background-color: #32AD65;
color: #e5e6e7;
}

.rst-content .note, .rst-content .seealso, .rst-content .wy-alert-info.admonition, .rst-content .wy-alert-info.admonition-todo, .rst-content .wy-alert-info.attention, .rst-content .wy-alert-info.caution, .rst-content .wy-alert-info.danger, .rst-content .wy-alert-info.error, .rst-content .wy-alert-info.hint, .rst-content .wy-alert-info.important, .rst-content .wy-alert-info.tip, .rst-content .wy-alert-info.warning, .wy-alert.wy-alert-info,
.rst-content .hint, .rst-content .important, .rst-content .tip, .rst-content .wy-alert-success.admonition, .rst-content .wy-alert-success.admonition-todo, .rst-content .wy-alert-success.attention, .rst-content .wy-alert-success.caution, .rst-content .wy-alert-success.danger, .rst-content .wy-alert-success.error, .rst-content .wy-alert-success.note, .rst-content .wy-alert-success.seealso, .rst-content .wy-alert-success.warning, .wy-alert.wy-alert-success{
color: #343434;
background-color: #e3e3e3;
border: none;
}


.rst-content .admonition-todo .admonition-title, .rst-content .admonition-todo .wy-alert-title, .rst-content .attention .admonition-title, .rst-content .attention .wy-alert-title, .rst-content .caution .admonition-title, .rst-content .caution .wy-alert-title, .rst-content .warning .admonition-title, .rst-content .warning .wy-alert-title, .rst-content .wy-alert-warning.admonition .admonition-title, .rst-content .wy-alert-warning.admonition .wy-alert-title, .rst-content .wy-alert-warning.danger .admonition-title, .rst-content .wy-alert-warning.danger .wy-alert-title, .rst-content .wy-alert-warning.error .admonition-title, .rst-content .wy-alert-warning.error .wy-alert-title, .rst-content .wy-alert-warning.hint .admonition-title, .rst-content .wy-alert-warning.hint .wy-alert-title, .rst-content .wy-alert-warning.important .admonition-title, .rst-content .wy-alert-warning.important .wy-alert-title, .rst-content .wy-alert-warning.note .admonition-title, .rst-content .wy-alert-warning.note .wy-alert-title, .rst-content .wy-alert-warning.seealso .admonition-title, .rst-content .wy-alert-warning.seealso .wy-alert-title, .rst-content .wy-alert-warning.tip .admonition-title, .rst-content .wy-alert-warning.tip .wy-alert-title, .rst-content .wy-alert.wy-alert-warning .admonition-title, .wy-alert.wy-alert-warning .rst-content .admonition-title, .wy-alert.wy-alert-warning .wy-alert-title {
background-color: #f4a25b;
}
.rst-content .admonition-todo, .rst-content .attention, .rst-content .caution, .rst-content .warning, .rst-content .wy-alert-warning.admonition, .rst-content .wy-alert-warning.danger, .rst-content .wy-alert-warning.error, .rst-content .wy-alert-warning.hint, .rst-content .wy-alert-warning.important, .rst-content .wy-alert-warning.note, .rst-content .wy-alert-warning.seealso, .rst-content .wy-alert-warning.tip, .wy-alert.wy-alert-warning {
color: #343434;
background-color: #e3e3e3;
}


}
@media (prefers-color-scheme: dark) {
.wy-nav-content-wrap {
background-color: #181a1b
}
.wy-nav-top, .wy-side-nav-search, .wy-menu-vertical a:active {
background-color: #32AD65;
}
.wy-menu-vertical header, .wy-menu-vertical p.caption {
color:#32AD65;
}
.wy-nav-side{
background-color: #2E2E2E;
}
.wy-nav-content{
background-color: #343434;
color: #e5e6e7;
}
a, a:hover, a:focus, a:active {
color: #6fb2e8;
}
code, .rst-content code.literal{
background-color: rgba(220,220,220,0.1);
color: #db9444;
border: none;
}
.wy-side-nav-search input[type=text]{
border: none;
background-color: #e5e6e7;
}
.wy-side-nav-search>div.version{
color: #e5e6e7c9;
}
.wy-side-nav-search .wy-dropdown>a, .wy-side-nav-search>a {
color: #e5e6e7;
}

html.writer-html4 .rst-content dl:not(.docutils)>dt, html.writer-html5 .rst-content dl[class]:not(.option-list):not(.field-list):not(.footnote):not(.glossary):not(.simple)>dt {
background-color: #32AD65;
border:none;
}
html.writer-html4 .rst-content dl:not(.docutils) dl:not(.field-list)>dt, html.writer-html5 .rst-content dl[class]:not(.option-list):not(.field-list):not(.footnote):not(.glossary):not(.simple) dl:not(.field-list)>dt{
background-color:#777;
color:#e5e6e7a6;
}
.rst-content code {
color: #e5e6e7d4;
}
.rst-content .method>dt>code {
color: #e5e6e7;
}
.sig-paren{
color: #db9444;
}
.rst-content .note .admonition-title{
background-color: #72757bfc
}
.rst-content div[class^=highlight], .rst-content pre.literal-block{
border:none;
}

.highlight{
background-color: #242424;
color: #e5e6e7;
}
.highlight .hll{
color: #e5e6e7;
background-color: #585b60fc;
}
.highlight .k, .highlight .nt, .highlight .no{
color: #6fb2e8;
}
.highlight .s, .highlight .s1, .highlight .s2{
color: #32AD65;
}
.highlight .nb, .highlight .o{
color: #db9444;
}
.highlight .c1{
color: #88898afc;
}
.highlight .nv{
color: #f9d977;
}
.btn.btn-neutral {
background-color: #e5e6e7d4 !important;
}

.rst-content .hint .admonition-title, .rst-content .hint .wy-alert-title, .rst-content .important .admonition-title, .rst-content .important .wy-alert-title, .rst-content .tip .admonition-title, .rst-content .tip .wy-alert-title, .rst-content .wy-alert-success.admonition-todo .admonition-title, .rst-content .wy-alert-success.admonition-todo .wy-alert-title, .rst-content .wy-alert-success.admonition .admonition-title, .rst-content .wy-alert-success.admonition .wy-alert-title, .rst-content .wy-alert-success.attention .admonition-title, .rst-content .wy-alert-success.attention .wy-alert-title, .rst-content .wy-alert-success.caution .admonition-title, .rst-content .wy-alert-success.caution .wy-alert-title, .rst-content .wy-alert-success.danger .admonition-title, .rst-content .wy-alert-success.danger .wy-alert-title, .rst-content .wy-alert-success.error .admonition-title, .rst-content .wy-alert-success.error .wy-alert-title, .rst-content .wy-alert-success.note .admonition-title, .rst-content .wy-alert-success.note .wy-alert-title, .rst-content .wy-alert-success.seealso .admonition-title, .rst-content .wy-alert-success.seealso .wy-alert-title, .rst-content .wy-alert-success.warning .admonition-title, .rst-content .wy-alert-success.warning .wy-alert-title, .rst-content .wy-alert.wy-alert-success .admonition-title, .wy-alert.wy-alert-success .rst-content .admonition-title, .wy-alert.wy-alert-success .wy-alert-title{
background-color: #32AD65;
color: #e5e6e7;
}

.rst-content .note, .rst-content .seealso, .rst-content .wy-alert-info.admonition, .rst-content .wy-alert-info.admonition-todo, .rst-content .wy-alert-info.attention, .rst-content .wy-alert-info.caution, .rst-content .wy-alert-info.danger, .rst-content .wy-alert-info.error, .rst-content .wy-alert-info.hint, .rst-content .wy-alert-info.important, .rst-content .wy-alert-info.tip, .rst-content .wy-alert-info.warning, .wy-alert.wy-alert-info,
.rst-content .hint, .rst-content .important, .rst-content .tip, .rst-content .wy-alert-success.admonition, .rst-content .wy-alert-success.admonition-todo, .rst-content .wy-alert-success.attention, .rst-content .wy-alert-success.caution, .rst-content .wy-alert-success.danger, .rst-content .wy-alert-success.error, .rst-content .wy-alert-success.note, .rst-content .wy-alert-success.seealso, .rst-content .wy-alert-success.warning, .wy-alert.wy-alert-success{
color: #343434;
background-color: #e3e3e3;
border: none;
}

.rst-content .admonition-todo .admonition-title, .rst-content .admonition-todo .wy-alert-title, .rst-content .attention .admonition-title, .rst-content .attention .wy-alert-title, .rst-content .caution .admonition-title, .rst-content .caution .wy-alert-title, .rst-content .warning .admonition-title, .rst-content .warning .wy-alert-title, .rst-content .wy-alert-warning.admonition .admonition-title, .rst-content .wy-alert-warning.admonition .wy-alert-title, .rst-content .wy-alert-warning.danger .admonition-title, .rst-content .wy-alert-warning.danger .wy-alert-title, .rst-content .wy-alert-warning.error .admonition-title, .rst-content .wy-alert-warning.error .wy-alert-title, .rst-content .wy-alert-warning.hint .admonition-title, .rst-content .wy-alert-warning.hint .wy-alert-title, .rst-content .wy-alert-warning.important .admonition-title, .rst-content .wy-alert-warning.important .wy-alert-title, .rst-content .wy-alert-warning.note .admonition-title, .rst-content .wy-alert-warning.note .wy-alert-title, .rst-content .wy-alert-warning.seealso .admonition-title, .rst-content .wy-alert-warning.seealso .wy-alert-title, .rst-content .wy-alert-warning.tip .admonition-title, .rst-content .wy-alert-warning.tip .wy-alert-title, .rst-content .wy-alert.wy-alert-warning .admonition-title, .wy-alert.wy-alert-warning .rst-content .admonition-title, .wy-alert.wy-alert-warning .wy-alert-title {
background-color: #f4a25b;
}
.rst-content .admonition-todo, .rst-content .attention, .rst-content .caution, .rst-content .warning, .rst-content .wy-alert-warning.admonition, .rst-content .wy-alert-warning.danger, .rst-content .wy-alert-warning.error, .rst-content .wy-alert-warning.hint, .rst-content .wy-alert-warning.important, .rst-content .wy-alert-warning.note, .rst-content .wy-alert-warning.seealso, .rst-content .wy-alert-warning.tip, .wy-alert.wy-alert-warning {
color: #343434;
background-color: #e3e3e3;
}
}
6 changes: 5 additions & 1 deletion docs/api/_src/conf.py
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Original file line number Diff line number Diff line change
Expand Up @@ -14,9 +14,9 @@
#
import os
import sys
import nf_core

sys.path.insert(0, os.path.abspath("../../../nf_core"))
import nf_core

# -- Project information -----------------------------------------------------

Expand Down Expand Up @@ -90,6 +90,10 @@

# Custom sidebar templates, must be a dictionary that maps document names
# to template names.
html_css_files = [
"css/custom.css",
]

#
# The default sidebars (for documents that don't match any pattern) are
# defined by theme itself. Builtin themes are using these templates by
Expand Down
2 changes: 2 additions & 0 deletions requirements-dev.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -3,3 +3,5 @@ pytest-datafiles
pytest-cov
mock
black
Sphinx
sphinx_rtd_theme