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BUG: subprocess.Popen requres list of arguments to be strings #449

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Merged
merged 1 commit into from
Aug 22, 2012
Merged

BUG: subprocess.Popen requres list of arguments to be strings #449

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3 changes: 2 additions & 1 deletion nipype/pipeline/plugins/pbs.py
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Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,8 @@ def __init__(self, **kwargs):
super(PBSPlugin, self).__init__(template, **kwargs)

def _is_pending(self, taskid):
proc = subprocess.Popen(["qstat", taskid],
# subprocess.Popen requires taskid to be a string
proc = subprocess.Popen(["qstat", str(taskid)],
stdout=subprocess.PIPE,
stderr=subprocess.PIPE)
_, e = proc.communicate()
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3 changes: 2 additions & 1 deletion nipype/pipeline/plugins/sge.py
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Expand Up @@ -37,7 +37,8 @@ def __init__(self, **kwargs):
super(SGEPlugin, self).__init__(template, **kwargs)

def _is_pending(self, taskid):
proc = subprocess.Popen(["qstat", '-j', taskid],
# subprocess.Popen requires taskid to be a string
proc = subprocess.Popen(["qstat", '-j', str(taskid)],
stdout=subprocess.PIPE,
stderr=subprocess.PIPE)
o, _ = proc.communicate()
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