New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

circulome-seq term #872

Open
jahilton opened this Issue Nov 6, 2017 · 2 comments

Comments

Projects
None yet
2 participants
@jahilton

jahilton commented Nov 6, 2017

Since the inclusion of OBI:0002144, the lab has posted a publication referencing circulome-seq.
http://www.g3journal.org/content/ggg/early/2017/08/11/g3.117.300141.full.pdf

Do you think it would be appropriate to add 'circulome-seq' as a synonym to the existing term or more appropriate to create a new term underneath it?

The distinction, if we were to make one, is in the DNA enrichment, so the definition might be...
An extrachromosomal circular DNA sequencing assay which utilizes a combination of biophysical (CsCl) and enzymatic (ExoV) approaches for circular DNA enrichment, followed by Tn5 tagmentation allowing library construction from a very low quantity of input material and providing informatic advantage at analysis stages of the sequencing data.

@bpeters42

This comment has been minimized.

Show comment
Hide comment
@bpeters42

bpeters42 Nov 6, 2017

bpeters42 commented Nov 6, 2017

@jahilton

This comment has been minimized.

Show comment
Hide comment
@jahilton

jahilton Nov 6, 2017

That was my feeling as well because the goal & general method is the same.

jahilton commented Nov 6, 2017

That was my feeling as well because the goal & general method is the same.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment