Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Adding new taxon IDs to taxslim. Adding an ID for every taxon that can be a causative agent in an infectious disease, according to Mondo axiomatizations. #59

Merged
merged 1 commit into from
Dec 13, 2021
Merged

Adding new taxon IDs to taxslim. Adding an ID for every taxon that can be a causative agent in an infectious disease, according to Mondo axiomatizations. #59

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 5 additions & 0 deletions subsets/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,10 @@ Note that the taxslim.obo used in this repository is *not* the release
version. The release is produced by Jenkins and consumed by the OBO
library build.

Note that if you add new IDs to `taxon-subset-ids.txt`, make sure this
is placed in alphanumeric order. If in doubt, normalize ordering use
the unix `sort` command

## disjointness GCIs

this makefile also includes a target for `taxslim-disjoint-over-in-taxon.owl`
Expand All @@ -28,3 +32,4 @@ This is GCIs of the form
(in-taxon some A) DisjointWith (in-taxon some B)

These are necessary for reasoning within the profile supported by Elk, which [does not include ONLY or Functional](https://github.com/liveontologies/elk-reasoner/wiki/OwlFeatures)

Loading