- plot CAG reapeats human genome.
- implemented a tokenizer approach with async to enable faster searches as compared to regex based.
- profiling all CAG repeat across human genome or any other genome at async speed.
- make sure you have matplotlib installed.
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CAG repeat pattern.
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Gaurav Sablok,
Email: codeprog@icloud.com
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Usage: CAGrepeat-analyzer <COMMAND>
Commands:
cag-repeat CAG repeat pattern
cag-plot plot the CAG
help Print this message or the help of the given subcommand(s)
Options:
-h, --help Print help
-V, --version Print version
./target/debug/CAGrepeat-analyzer cag-repeat ./test-files/test.fa
ENST00000832824.1 4
./target/debug/CAGrepeat-analyzer cag-plot ./test-files/test.fa outputnew
Gaurav Sablok codeprog@icloud.com