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Create iv_all.py #19

Merged
merged 3 commits into from
Dec 29, 2014
Merged

Create iv_all.py #19

merged 3 commits into from
Dec 29, 2014

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VahidGh
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@VahidGh VahidGh commented Dec 24, 2014

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@slarson
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slarson commented Dec 26, 2014

@VahidGh How does this one relate to the other gist that we were looking at with the Calcium I/V plot?

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VahidGh commented Dec 27, 2014

This one includes both Ca and K(Kf + Ks) currents and also uses input.csv file which is being used in the main version of the model (the matlab version).
Also this script uses all the time-based voltage values and their corresponding e, f, and h (de/dt, df/dt, and dh/dt), so includes the peak values (although I wrote another script based on the peak values, that generates the out-most curve in this plot)
The aim of the script is to compare individual I-V curves in this model, with related channel curves from literature.
With limited samples (e.g 11 voltage samples) it needs a little optimization to fit the final curves.

On Sat, Dec 27, 2014 at 12:58 AM, Stephen Larson notifications@github.com
wrote:

@VahidGh https://github.com/VahidGh How does this one relate to the
other gist that we were looking at with the Calcium I/V plot?


Reply to this email directly or view it on GitHub
#19 (comment).

slarson added a commit that referenced this pull request Dec 29, 2014
@slarson slarson merged commit 8ff218a into openworm:master Dec 29, 2014
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slarson commented Dec 29, 2014

Thanks!

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3 participants