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Performance of tidyr::unnest in fastr #71

@hsselman

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@hsselman

Hi,

I am using graalvm and fastr rc-15. I was testing the tidyr package in fastr. I got no errors using the functions I want to use. But I did found it extremely slow. I use the function unnest from the tidyr package to split a data.frame on a list column.

For example, I made this file (let's call it tidyr_unnest.R):

library(pdftools)
library(glue)
library(tidyr)
library(tictoc)

# A lot of code to get an object to test performance on
img <- pdf_render_page(pdf = "https://cran.r-project.org/web/packages/purrr/purrr.pdf", page = 1)
dimension <- dim(img)
img_glued <- glue('#{img[1, 1:dimension[2], 1:dimension[3]]}{img[2, 1:dimension[2], 1:dimension[3]]}{img[3, 1:dimension[2], 1:dimension[3]]}{img[4, 1:dimension[2], 1:dimension[3]]}')
img_mat <- matrix(img_glued, nrow = dimension[2], ncol = dimension[3])
img_mat_not_white <- img_mat!="#ffffffff"
l <- dim(img_mat_not_white)[1]
list_y <- data.frame(y = rep(NA_integer_, l), stringsAsFactors = FALSE)
list_y$x <- list(NA_integer_)
for(i in 1:l){
  x <- which(img_mat_not_white[i,])
  if(length(x) > 0){
    list_y$y[i] <- i
    list_y$x[i] <- list(x)
  }
}
list_y <- list_y[!is.na(list_y$y),]
list_y$Freq <- sapply(list_y$x, length)
list_y$split <- lapply(list_y$x, function(y){
  split(y, cumsum(diff(c(0, y)) > 1))
})

tic("Unnest nested lists (using tidyr::unnest)")
unnest_list_y <- unnest(list_y, split)
toc()

Sourcing the files in R and fastR (source("tidyr_unnest.R")) gives me:

# R
Unnest nested lists (using tidyr::unnest): 0.021 sec elapsed

# fastR
Unnest nested lists (using tidyr::unnest): 3.925 sec elapsed

Do you know what is happening? Thanks in advance and for developing fastR!

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