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--all-positions

--all-positions #846

on: [ push ]
name: build and test
jobs:
build_and_test:
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v4
- name: Install required packages
run: sudo apt-get update && sudo apt-get install -y
git
bash
cmake
make
g++
python3-dev
python3-distutils
autoconf
build-essential
libjemalloc-dev
- name: Init and update submodules
run: git submodule update --init --recursive
- name: Build odgi
run: cmake -H. -DCMAKE_BUILD_TYPE=Debug -Bbuild && cmake --build build -- -j 2
- name: Run odgi program tests
run: ASAN_OPTIONS=detect_leaks=1:symbolize=1 LSAN_OPTIONS=verbosity=0:log_threads=1 bin/odgi test
- name: Run remaining tests
run: ctest --test-dir build -E odgi-test --verbose