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Issues list

Missing usage documentation on gtfilter
#88 opened Jun 17, 2024 by IdoBar
1
can snpsift rename the INFO/TAG？
#87 opened Feb 27, 2024 by litun-fkby
Adding alphamissense and other annotations from the latest dbNSFP
#86 opened Dec 6, 2023 by ramirobarrantes
how to filter based on FREQ?
#83 opened Jul 24, 2023 by chunxuan-hs
extract "ANN[*].RANK" from the ANN field
#82 opened Feb 15, 2023 by gcy0115
SnpSift split outputs only the first chromosome
#81 opened Dec 16, 2022 by kmavrommatis
6
CNV error
#78 opened Nov 24, 2022 by weichenyangs
Filtering variants with a supporting read in the normal sample
#76 opened Jul 29, 2022 by yoakiyama
annotate parameters
#74 opened Jul 5, 2022 by lmanchon
How to deal with conflicting INFO field names
#73 opened Jul 4, 2022 by rhdolin
1
"SnpSift.jar annotate -id" and "SnpSift.jar annotate" have the same results
#72 opened Jun 2, 2022 by jiriny
filter intergenic region structural variants
#71 opened May 31, 2022 by prasundutta87
dbNSFP not annotating entries
#70 opened May 9, 2022 by ji575
1
INTERVAL header missing
#69 opened Mar 15, 2022 by Talya-dor
Mismatch between LICENSE.md and pom.xml concerning the license
#68 opened Feb 27, 2022 by pgrt
junit scope should be "test" in pom.xml
#67 opened Feb 26, 2022 by pgrt
dbSNP not found
#66 opened Feb 11, 2022 by GENEDECODERS
Log4j vulnerability
#64 opened Dec 14, 2021 by sandra-selfdecode
SnpSift Extract Fields: GT does not match Allele
#63 opened Dec 10, 2021 by saphiecor
Dashes in variant names
#62 opened Sep 23, 2021 by ChadMatsalla
SnpSift in multiallelic variants
#61 opened Sep 10, 2021 by rogeriobioinfo
ProTip! Updated in the last three days: updated:>2024-07-11.