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@iskandr iskandr released this 29 Oct 18:44
· 11 commits to main since this release
v1.22.2
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OncoRef now reads the released dog protein dataset through the common species expression API and data commands. It preserves native iBAQ, pooling, missing values and unresolved protein-group representatives. The optional quantitative extra enables managed acquisition on Python 3.11+; core and portable replay support Python 3.10.

Portable exports retain source measurements, samples, assays and mappings. The 9,929-by-38 matrix exactly matches the prior import, and its 33.8 MB native-record export replays without ORFdata installed. Ordinary transfer is 84.4 MB; installed data is 1.4 GB. Peptide enrichment remains a separate follow-up under #585.

PR: #645
PyPI: https://pypi.org/project/oncoref/1.22.2/

Validation: 2,785 local tests passed, 6 optional skips; all eight CI checks passed at the reviewed head, including Python 3.10–3.14. Final wheel acceptance passed with public ORFdata 0.42.2 and in a core-only environment. Published distributions are the exact tested files; source bytes and the merged tree were verified before upload. Attached receipts record checksums and consumer results.

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