Fixing 2 tests that still where raising warnings

Author: josenavas

qiita_db/test/test_analysis.py

@@ -209,7 +209,9 @@ def test_retrieve_dropped_samples(self):
                             'Description': 'Test Sample 1',
                             'str_column': 'Value for sample 1',
                             'latitude': 42.42,
-                            'longitude': 41.41},
+                            'longitude': 41.41,
+                            'taxon_id': 9606,
+                            'scientific_name': 'homo sapiens'},
             'SKD8.640184': {'physical_specimen_location': 'location1',
                             'physical_specimen_remaining': True,
                             'dna_extracted': True,
@@ -221,7 +223,9 @@ def test_retrieve_dropped_samples(self):
                             'Description': 'Test Sample 2',
                             'str_column': 'Value for sample 2',
                             'latitude': 4.2,
-                            'longitude': 1.1},
+                            'longitude': 1.1,
+                            'taxon_id': 9606,
+                            'scientific_name': 'homo sapiens'},
             'SKB7.640196': {'physical_specimen_location': 'location1',
                             'physical_specimen_remaining': True,
                             'dna_extracted': True,
@@ -233,7 +237,9 @@ def test_retrieve_dropped_samples(self):
                             'Description': 'Test Sample 3',
                             'str_column': 'Value for sample 3',
                             'latitude': 4.8,
-                            'longitude': 4.41},
+                            'longitude': 4.41,
+                            'taxon_id': 9606,
+                            'scientific_name': 'homo sapiens'},
             }
         metadata = pd.DataFrame.from_dict(metadata_dict, orient='index')
 

qiita_db/test/test_commands.py

@@ -725,19 +725,19 @@ def test_update_preprocessed_data_from_cmd_ppd(self):
     "sample_name\trequired_sample_info_status\tcollection_timestamp\t"
     "sample_type\tphysical_specimen_remaining\tphysical_specimen_location\t"
     "dna_extracted\thost_subject_id\tTreatment\tDOB\tlatitude\tlongitude"
-    "\tDescription\n"
+    "\ttaxon_id\tscientific_name\tDescription\n"
     "PC.354\treceived\t2014-06-18 16:44\ttype_1\tTrue\tLocation_1\tTrue\t"
     "HS_ID_PC.354\tControl\t20061218\t1.88401499993\t56.0003871552\t"
-    "Control_mouse_I.D._354\n"
+    "9606\thomo sapiens\tControl_mouse_I.D._354\n"
     "PC.593\treceived\t2014-06-18 16:44\ttype_1\tTrue\tLocation_1\tTrue\t"
     "HS_ID_PC.593\tControl\t20071210\t35.4079458313\t83.2595338611\t"
-    "Control_mouse_I.D._593\n"
+    "9606\thomo sapiens\tControl_mouse_I.D._593\n"
     "PC.607\treceived\t2014-06-18 16:44\ttype_1\tTrue\tLocation_1\tTrue\t"
     "HS_ID_PC.607\tFast\t20071112\t18.3175615444\t91.3713989729\t"
-    "Fasting_mouse_I.D._607\n"
+    "9606\thomo sapiens\tFasting_mouse_I.D._607\n"
     "PC.636\treceived\t2014-06-18 16:44\ttype_1\tTrue\tLocation_1\tTrue\t"
     "HS_ID_PC.636\tFast\t20080116\t31.0856060708\t4.16781143893\t"
-    "Fasting_mouse_I.D._636")
+    "9606\thomo sapiens\tFasting_mouse_I.D._636")
 
 PREP_TEMPLATE = (
     'sample_name\tbarcode\tcenter_name\tcenter_project_name\t'