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Merge branch '1084-data' into 1084-qiita-db
2 parents 2b613e0 + 3b20fa6 commit c1c6f14

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qiita_db/support_files/populate_test_db.sql

Lines changed: 1 addition & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -304,16 +304,13 @@ INSERT INTO qiita.prep_1 (sample_id, barcode, LIBRARY_CONSTRUCTION_PROTOCOL, pri
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-- Link the prep template to the study
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INSERT INTO qiita.study_prep_template (study_id, prep_template_id) VALUES (1, 1);
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307-
-- Insert the raw data information for prep_template 1 and 2
308-
-- INSERT INTO qiita.raw_data (filetype_id) VALUES (3), (2);
307+
-- Insert the raw data information for prep_template 1
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INSERT INTO qiita.raw_data (filetype_id) VALUES (3);
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-- Insert the raw data filepaths for study 1
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INSERT INTO qiita.filepath (filepath, filepath_type_id, checksum, checksum_algorithm_id, data_directory_id) VALUES
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('1_s_G1_L001_sequences.fastq.gz', 1, '852952723', 1, 5),
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('1_s_G1_L001_sequences_barcodes.fastq.gz', 3, '852952723', 1, 5);
315-
-- ('2_sequences.fastq.gz', 1, '852952723', 1, 5),
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-- ('2_sequences_barcodes.fastq.gz', 3, '852952723', 1, 5);
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-- Insert (link) the raw data with the raw filepaths
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INSERT INTO qiita.raw_filepath (raw_data_id, filepath_id) VALUES (1, 1), (1, 2);
@@ -426,19 +423,6 @@ INSERT INTO qiita.term (term_id, ontology_id, term, identifier, definition, name
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INSERT INTO qiita.filepath (filepath, filepath_type_id, checksum, checksum_algorithm_id, data_directory_id) VALUES ('1_19700101-000000.txt', 14, '852952723', 1, 9);
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INSERT INTO qiita.sample_template_filepath VALUES (1, 14);
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429-
-- INSERT INTO qiita.filepath (filepath, filepath_type_id, checksum, checksum_algorithm_id, data_directory_id) VALUES
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-- ('1_preprocess_test1.sff', 17, '852952723', 1, 5),
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-- ('1_preprocess_test2.sff', 17, '852952723', 1, 5);
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-- Insert the raw data information for study 1
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-- INSERT INTO qiita.raw_data (filetype_id) VALUES (1), (1);
435-
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-- Insert (link) the raw data with the raw filepaths
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-- INSERT INTO qiita.raw_filepath (raw_data_id, filepath_id) VALUES (3, 17), (3, 18);
438-
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-- Insert (link) the study with the raw data
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-- INSERT INTO qiita.study_raw_data (study_id, raw_data_id) VALUES (1, 3), (1, 4);
441-
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-- Add processing parameters for sortmerna
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INSERT INTO qiita.processed_params_sortmerna (reference_id, sortmerna_e_value, sortmerna_max_pos, similarity, sortmerna_coverage, threads) VALUES (1, 1, 10000, 0.97, 0.97, 1);
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