modules changes on stampede

[vivek-bala]

I think the modules 'cluster' and 'Linux' have been removed from Stampede. RP-devel currently fails on stampede since it tries to load these modules. Removing the two from the config worked.

[andre-merzky]

Thanks Vivek!

How are modules holding up otherwise after the maintenance? Are the application codes still loading ok?

[vivek-bala]

Yes, generally they seem to be stable. I am facing no problems with the specific modules I have been using for my applications.

Also, want to point out that although mpi4py is available with python/2.7.9 on Stampede. I had to manually set the PATH to /opt/apps/intel13/mvapich2_1_9/python/2.7.9/lib/python2.7/site-packages/mpi4py

[marksantcroos]

Does the latter require action? I notice intel13 though ...

[vivek-bala]

Sorry, I didn't get your question.

[marksantcroos]

I meant does the issue with setting a manual path means this ticket can not be closed? And at the same time I noticed you mention intel13 which sounds like a conflict with the new defaults.

[vivek-bala]

I meant does the issue with setting a manual path means this ticket can not be closed?

No, I just wanted to notify about it.

And at the same time I noticed you mention intel13 which sounds like a conflict with the new defaults.

I require netcdf and hdf5 modules on Stampede which are only available with intel/13.0.2.146.

I just ran into memory errors while using mpi4py (intel/13_) for large molecules, I should maybe try local installations of netcdf and hdf5 with intel/15_.