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Support independent pods for each workflow/job? #64

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1 of 4 tasks
jirikuncar opened this issue Jun 26, 2018 · 4 comments
Open
1 of 4 tasks

Support independent pods for each workflow/job? #64

jirikuncar opened this issue Jun 26, 2018 · 4 comments

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@jirikuncar
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jirikuncar commented Jun 26, 2018

  • create separate pods for each workflow/job?
  • shared volume per workflow
  • publish outputs after a job finishes
  • make job template configurable (init containers, volumes, ...)
@jirikuncar jirikuncar changed the title Support independent pods for each workflow Support independent pods for each workflow/job? Jun 26, 2018
@lukasheinrich
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lukasheinrich commented Jun 27, 2018

Hi @jirikuncar,

the individual jobs of a workflow are already one pod each. Currently only with a single ctr, but it's just a matter of exposing init containers. The jobs get a shared volume mounted by default.

We are working on a feature, where the submitted workflow engine instances (i.e. the thing that submits the steps in the right sequence) also gets started as either a) a Job for noninteractive workflows or b) a Deployment for interactive workflows (think: a notebook that steers the workflow)

init containers are something we have on our radar but it's not clear yet how to incorporate them. Generally I personally think the job-ctrl should be a quite thin layer on top of k8s and expose most APIs as long as they are secure, but it does tie us to Kubernetes a bit.

@rokroskar
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@lukasheinrich, can the jobs then use the shared volume mount for sharing results? I thought results of individual jobs get pushed to CephFS.

@lukasheinrich
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yes in the case of a shared filesystem there is one CephFS volume that needs to be shared between the

  +-----[ engine ]
  |
+---+
| V  |----[ job1 ]
+---+
  |
  +[ job2 ]

Later (when jobs 1 and 2 are finished, the engine starts job 3):

  +-----[ engine ]
  |
+---+
| V |
+---+
  |
  +[ job3 ]

the volume lifetime is in principle independent of the pod lifetime (though one could also instruct the engine to copy only a subset of the data to a "results" volume and then delete the workflow volume, in which caase the lifetime of the volume and the engine pod is the same

@diegodelemos
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diegodelemos commented Oct 4, 2019

Workflow pods are now independent and belong to the user who created them (more details about implementation here).

@diegodelemos diegodelemos added this to Cluster future in Triage Oct 4, 2019
mdonadoni added a commit to mdonadoni/reana that referenced this issue Mar 5, 2024
chore(reana-ui/master): release 0.9.4

build(reana-ui/package): update yarn.lock (reanahub#399)

build(reana-ui/package): require jsroot<7.6.0 (reanahub#399)

ci(reana-ui/commitlint): allow release commit style (reanahub#400)

docs(reana-ui/authors): complete list of contributors (reanahub#396)

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fix(reana-ui/launcher): remove dollar sign in generated Markdown (reanahub#389)

ci(reana-ui/release-please): update version in package.json and Dockerfile (reanahub#385)

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refactor(reana-message-broker/docs): move from reST to Markdown (reanahub#65)

ci(reana-message-broker/commitlint): check for the presence of concrete PR number (reanahub#64)

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ci(reana-message-broker/release-please): update version in Dockerfile (reanahub#63)

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ci(reana-workflow-engine-yadage/commitlint): check for the presence of concrete PR number (reanahub#257)

ci(reana-workflow-engine-yadage/shellcheck): fix exit code propagation (reanahub#257)

build(reana-workflow-engine-yadage/docker): install correct extras of reana-commons submodule (reanahub#256)

ci(reana-workflow-engine-yadage/release-please): update version in Dockerfile (reanahub#254)

build(reana-workflow-engine-yadage/docker): non-editable submodules in "latest" mode (reanahub#249)

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ci(reana-workflow-engine-yadage/commitlint): addition of commit message linter (reanahub#251)

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fix(reana-workflow-engine-snakemake/progress): handle stopped jobs (reanahub#78)

ci(reana-workflow-engine-snakemake/commitlint): check for the presence of concrete PR number (reanahub#80)

ci(reana-workflow-engine-snakemake/shellcheck): fix exit code propagation (reanahub#80)

build(reana-workflow-engine-snakemake/docker): install correct extras of reana-commons submodule (reanahub#79)

ci(reana-workflow-engine-snakemake/release-please): update version in Dockerfile (reanahub#77)

build(reana-workflow-engine-snakemake/docker): non-editable submodules in "latest" mode (reanahub#73)

ci(reana-workflow-engine-snakemake/release-please): initial configuration (reanahub#74)

ci(reana-workflow-engine-snakemake/commitlint): addition of commit message linter (reanahub#74)
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