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cli: initial release of reana helper script #65

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merged 1 commit into from Jul 4, 2018
Merged

cli: initial release of reana helper script #65

merged 1 commit into from Jul 4, 2018

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tiborsimko
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  • Initial release of reana helper script that facilitates working with
    multiple repositories for local development and integration testing purposes.

Signed-off-by: Tibor Simko tibor.simko@cern.ch

@tiborsimko tiborsimko added this to the Internal-Consolidation milestone Jul 1, 2018
@tiborsimko tiborsimko self-assigned this Jul 1, 2018
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@diegodelemos Here's the PR we talked about on Friday. @dinosk This is basically the clickified version of my local integration shell scripts. Please have a look if this seems useful; if we like this we can extend them later. Can talk more IRL.

jirikuncar
jirikuncar reviewed Jul 1, 2018
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reana/cli.py Outdated
SRCDIR = os.environ.get('REANA_SRCDIR',
os.path.expanduser('~/private/project/reana/src'))

GITHUB_USER = os.environ.get('REANA_GITHUB_USER', 'tiborsimko')
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os.getenv('REANA_GITHUB_USER', os.getenv('USER'))

jirikuncar
jirikuncar reviewed Jul 1, 2018
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reana/cli.py Outdated
import click

SRCDIR = os.environ.get('REANA_SRCDIR',
os.path.expanduser('~/private/project/reana/src'))
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Maybe os.getcwd() as more expectable default?

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I think the safest would be to exit with an error when the two environment variables are not set. The cwd may be good for initial cloning, but not for later operations if people are in a different directory...

jirikuncar
jirikuncar reviewed Jul 1, 2018
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reana/cli.py Outdated
' >> .git/config'.format(component),
'echo " fetch = +refs/heads/*:refs/remotes/upstream/*"'
' >> .git/config',
'echo " fetch = +refs/pull/*/head:refs/remotes/upstream/pr/*"'
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git config --add remote.upstream.fetch "+refs/pull/*/head:refs/remotes/upstream/pr/*"

jirikuncar
jirikuncar reviewed Jul 1, 2018
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reana/cli.py Outdated
cmd = 'git clone git@github.com:{0}/{1}'.format(user, component)
run_command(cmd)
for cmd in [
'echo \'[remote "upstream"]\' >> .git/config',
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@jirikuncar jirikuncar Jul 1, 2018 •
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git remote add upstream "git@github.com:reanahub/{0}"

jirikuncar
jirikuncar reviewed Jul 1, 2018
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setup.py
@@ -78,10 +86,16 @@
long_description=readme + '\n\n' + history,
author='REANA',
author_email='info@reana.io',
url='https://github.com/reanahub/reana',
url='http://www.reana.io/',
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HTTPS❓

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We don't have multi-domain certificate yet... coming later.

@tiborsimko tiborsimko force-pushed the reana-helper-script branch 2 times, most recently from 28bfecb to 674cf00 Compare July 2, 2018 15:49
@dinosk
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dinosk commented Jul 3, 2018

This is definitely useful imo 👍

@tiborsimko tiborsimko force-pushed the reana-helper-script branch 2 times, most recently from 8930805 to 8427407 Compare July 3, 2018 20:24
@tiborsimko
cli: initial release of reana helper script
8f246a4 
* Initial release of ``reana`` helper script that facilitates working with
  multiple repositories for local development and integration testing purposes.

Signed-off-by: Tibor Simko <tibor.simko@cern.ch>
@tiborsimko
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@diegodelemos If you started something on top of this, note that I have fixed the fetch option flag, added new fetch command and a simple name shortening test.

@diegodelemos diegodelemos merged commit 8f246a4 into reanahub:master Jul 4, 2018
@tiborsimko tiborsimko deleted the reana-helper-script branch July 4, 2018 08:53
mdonadoni added a commit to mdonadoni/reana that referenced this pull request Mar 5, 2024
@mdonadoni
chore: aggregate changelog
a493fb8 
chore(reana-ui/master): release 0.9.4

build(reana-ui/package): update yarn.lock (reanahub#399)

build(reana-ui/package): require jsroot<7.6.0 (reanahub#399)

ci(reana-ui/commitlint): allow release commit style (reanahub#400)

docs(reana-ui/authors): complete list of contributors (reanahub#396)

ci(reana-ui/shellcheck): exclude node_modules from the analyzed paths (reanahub#387)

fix(reana-ui/progress): update failed workflows duration using finish time (reanahub#387)

feat(reana-ui/footer): link privacy notice to configured URL (reanahub#393)

refactor(reana-ui/docs): move from reST to Markdown (reanahub#391)

ci(reana-ui/commitlint): check for the presence of concrete PR number (reanahub#390)

ci(reana-ui/shellcheck): fix exit code propagation (reanahub#390)

fix(reana-ui/launcher): remove dollar sign in generated Markdown (reanahub#389)

ci(reana-ui/release-please): update version in package.json and Dockerfile (reanahub#385)

ci(reana-ui/release-please): switch to `simple` release strategy (reanahub#383)

fix(reana-ui/router): show 404 page for invalid URLs (reanahub#382)

ci(reana-ui/release-please): initial configuration (reanahub#380)

ci(reana-ui/commitlint): addition of commit message linter (reanahub#380)

chore(reana-message-broker/master): release 0.9.3

ci(reana-message-broker/commitlint): allow release commit style (reanahub#67)

docs(reana-message-broker/authors): complete list of contributors (reanahub#66)

refactor(reana-message-broker/docs): move from reST to Markdown (reanahub#65)

ci(reana-message-broker/commitlint): check for the presence of concrete PR number (reanahub#64)

ci(reana-message-broker/shellcheck): fix exit code propagation (reanahub#64)

ci(reana-message-broker/release-please): update version in Dockerfile (reanahub#63)

fix(reana-message-broker/startup): handle signals for graceful shutdown (reanahub#59)

ci(reana-message-broker/release-please): initial configuration (reanahub#60)

ci(reana-message-broker/commitlint): addition of commit message linter (reanahub#60)

chore(reana-server/master): release 0.9.3

build(reana-server/python): bump all required packages as of 2024-03-04 (reanahub#674)

build(reana-server/python): bump shared REANA packages as of 2024-03-04 (reanahub#674)

build(reana-server/python): bump shared modules (reanahub#676)

ci(reana-server/commitlint): allow release commit style (reanahub#675)

docs(reana-server/authors): complete list of contributors (reanahub#673)

ci(reana-server/pytest): move to PostgreSQL 14.10 (reanahub#672)

refactor(reana-server/docs): move from reST to Markdown (reanahub#671)

style(reana-server/black): format with black v24 (reanahub#670)

ci(reana-server/commitlint): check for the presence of concrete PR number (reanahub#669)

ci(reana-server/shellcheck): fix exit code propagation (reanahub#669)

ci(reana-server/release-please): update version in Dockerfile/OpenAPI specs (reanahub#668)

build(reana-server/docker): non-editable submodules in "latest" mode (reanahub#656)

build(reana-server/deps): pin invenio-userprofiles to 1.2.4 (reanahub#665)

ci(reana-server/release-please): initial configuration (reanahub#665)

ci(reana-server/commitlint): addition of commit message linter (reanahub#665)

chore(reana-workflow-controller/master): release 0.9.3

build(reana-workflow-controller/python): bump all required packages as of 2024-03-04 (reanahub#574)

build(reana-workflow-controller/python): bump shared REANA packages as of 2024-03-04 (reanahub#574)

feat(reana-workflow-controller/manager): increase termination period of run-batch pods (reanahub#572)

ci(reana-workflow-controller/commitlint): allow release commit style (reanahub#575)

feat(reana-workflow-controller/manager): pass custom env variables to job controller (reanahub#571)

feat(reana-workflow-controller/manager): pass custom env variables to workflow engines (reanahub#571)

docs(reana-workflow-controller/authors): complete list of contributors (reanahub#570)

ci(reana-workflow-controller/pytest): move to PostgreSQL 14.10 (reanahub#568)

fix(reana-workflow-controller/manager): use valid group name when calling `groupadd` (reanahub#566)

refactor(reana-workflow-controller/docs): move from reST to Markdown (reanahub#567)

fix(reana-workflow-controller/stop): store engine logs of stopped workflow (reanahub#563)

fix(reana-workflow-controller/manager): graceful shutdown of job-controller (reanahub#559)

feat(reana-workflow-controller/manager): call shutdown endpoint before workflow stop (reanahub#559)

refactor(reana-workflow-controller/consumer): do not update status of jobs (reanahub#559)

style(reana-workflow-controller/black): format with black v24 (reanahub#564)

ci(reana-workflow-controller/commitlint): check for the presence of concrete PR number (reanahub#562)

ci(reana-workflow-controller/shellcheck): fix exit code propagation (reanahub#562)

ci(reana-workflow-controller/release-please): update version in Dockerfile/OpenAPI specs (reanahub#558)

build(reana-workflow-controller/docker): non-editable submodules in "latest" mode (reanahub#551)

ci(reana-workflow-controller/release-please): initial configuration (reanahub#555)

ci(reana-workflow-controller/commitlint): addition of commit message linter (reanahub#555)

chore(reana-job-controller/master): release 0.9.3

build(reana-job-controller/python): bump all required packages as of 2024-03-04 (reanahub#442)

build(reana-job-controller/python): bump shared REANA packages as of 2024-03-04 (reanahub#442)

ci(reana-job-controller/commitlint): allow release commit style (reanahub#443)

build(reana-job-controller/certificates): update expired CERN Grid CA certificate (reanahub#440)

fix(reana-job-controller/database): limit the number of open database connections (reanahub#437)

docs(reana-job-controller/authors): complete list of contributors (reanahub#434)

perf(reana-job-controller/cache): avoid caching jobs when the cache is disabled (reanahub#435)

ci(reana-job-controller/pytest): move to PostgreSQL 14.10 (reanahub#429)

refactor(reana-job-controller/docs): move from reST to Markdown (reanahub#428)

ci(reana-job-controller/commitlint): check for the presence of concrete PR number (reanahub#425)

ci(reana-job-controller/shellcheck): fix exit code propagation (reanahub#425)

feat(reana-job-controller/shutdown): stop all running jobs before stopping workflow (reanahub#423)

refactor(reana-job-controller/monitor): move fetching of logs to job-manager (reanahub#423)

refactor(reana-job-controller/db): set job status also in the main database (reanahub#423)

refactor(reana-job-controller/monitor): centralise logs and status updates (reanahub#423)

style(reana-job-controller/black): format with black v24 (reanahub#426)

ci(reana-job-controller/release-please): update version in Dockerfile/OpenAPI specs (reanahub#421)

build(reana-job-controller/docker): non-editable submodules in "latest" mode (reanahub#416)

ci(reana-job-controller/release-please): initial configuration (reanahub#417)

ci(reana-job-controller/commitlint): addition of commit message linter (reanahub#417)

chore(reana-workflow-engine-cwl/master): release 0.9.3

build(reana-workflow-engine-cwl/python): bump all required packages as of 2024-03-04 (reanahub#267)

build(reana-workflow-engine-cwl/python): bump shared REANA packages as of 2024-03-04 (reanahub#267)

docs(reana-workflow-engine-cwl/conformance-tests): update CWL conformance test badges (reanahub#264)

ci(reana-workflow-engine-cwl/commitlint): allow release commit style (reanahub#268)

docs(reana-workflow-engine-cwl/authors): complete list of contributors (reanahub#266)

refactor(reana-workflow-engine-cwl/docs): move from reST to Markdown (reanahub#263)

fix(reana-workflow-engine-cwl/progress): handle stopped jobs (reanahub#260)

ci(reana-workflow-engine-cwl/commitlint): check for the presence of concrete PR number (reanahub#262)

ci(reana-workflow-engine-cwl/shellcheck): fix exit code propagation (reanahub#262)

build(reana-workflow-engine-cwl/docker): install correct extras of reana-commons submodule (reanahub#261)

ci(reana-workflow-engine-cwl/release-please): update version in Dockerfile (reanahub#259)

build(reana-workflow-engine-cwl/docker): non-editable submodules in "latest" mode (reanahub#255)

ci(reana-workflow-engine-cwl/release-please): initial configuration (reanahub#256)

ci(reana-workflow-engine-cwl/commitlint): addition of commit message linter (reanahub#256)

chore(reana-workflow-engine-serial/master): release 0.9.3

build(reana-workflow-engine-serial/python): bump all required packages as of 2024-03-04 (reanahub#200)

build(reana-workflow-engine-serial/python): bump shared REANA packages as of 2024-03-04 (reanahub#200)

ci(reana-workflow-engine-serial/commitlint): allow release commit style (reanahub#201)

docs(reana-workflow-engine-serial/authors): complete list of contributors (reanahub#199)

refactor(reana-workflow-engine-serial/docs): move from reST to Markdown (reanahub#198)

fix(reana-workflow-engine-serial/progress): handle stopped jobs (reanahub#195)

ci(reana-workflow-engine-serial/commitlint): check for the presence of concrete PR number (reanahub#197)

ci(reana-workflow-engine-serial/shellcheck): fix exit code propagation (reanahub#197)

build(reana-workflow-engine-serial/docker): install correct extras of reana-commons submodule (reanahub#196)

ci(reana-workflow-engine-serial/release-please): update version in Dockerfile (reanahub#194)

build(reana-workflow-engine-serial/docker): non-editable submodules in "latest" mode (reanahub#190)

ci(reana-workflow-engine-serial/release-please): initial configuration (reanahub#191)

ci(reana-workflow-engine-serial/commitlint): addition of commit message linter (reanahub#191)

chore(reana-workflow-engine-yadage/master): release 0.9.4

build(reana-workflow-engine-yadage/python): bump all required packages as of 2024-03-04 (reanahub#261)

build(reana-workflow-engine-yadage/python): bump shared REANA packages as of 2024-03-04 (reanahub#261)

ci(reana-workflow-engine-yadage/commitlint): allow release commit style (reanahub#262)

docs(reana-workflow-engine-yadage/authors): complete list of contributors (reanahub#260)

refactor(reana-workflow-engine-yadage/docs): move from reST to Markdown (reanahub#259)

fix(reana-workflow-engine-yadage/progress): correctly handle running and stopped jobs (reanahub#258)

ci(reana-workflow-engine-yadage/commitlint): check for the presence of concrete PR number (reanahub#257)

ci(reana-workflow-engine-yadage/shellcheck): fix exit code propagation (reanahub#257)

build(reana-workflow-engine-yadage/docker): install correct extras of reana-commons submodule (reanahub#256)

ci(reana-workflow-engine-yadage/release-please): update version in Dockerfile (reanahub#254)

build(reana-workflow-engine-yadage/docker): non-editable submodules in "latest" mode (reanahub#249)

ci(reana-workflow-engine-yadage/release-please): initial configuration (reanahub#251)

ci(reana-workflow-engine-yadage/commitlint): addition of commit message linter (reanahub#251)

chore(reana-workflow-engine-snakemake/master): release 0.9.3

build(reana-workflow-engine-snakemake/python): bump all required packages as of 2024-03-04 (reanahub#85)

build(reana-workflow-engine-snakemake/python): bump shared REANA packages as of 2024-03-04 (reanahub#85)

ci(reana-workflow-engine-snakemake/commitlint): allow release commit style (reanahub#86)

feat(reana-workflow-engine-snakemake/config): get max number of parallel jobs from env vars (reanahub#84)

feat(reana-workflow-engine-snakemake/executor): upgrade to Snakemake v7.32.4 (reanahub#81)

docs(reana-workflow-engine-snakemake/authors): complete list of contributors (reanahub#83)

refactor(reana-workflow-engine-snakemake/docs): move from reST to Markdown (reanahub#82)

fix(reana-workflow-engine-snakemake/progress): handle stopped jobs (reanahub#78)

ci(reana-workflow-engine-snakemake/commitlint): check for the presence of concrete PR number (reanahub#80)

ci(reana-workflow-engine-snakemake/shellcheck): fix exit code propagation (reanahub#80)

build(reana-workflow-engine-snakemake/docker): install correct extras of reana-commons submodule (reanahub#79)

ci(reana-workflow-engine-snakemake/release-please): update version in Dockerfile (reanahub#77)

build(reana-workflow-engine-snakemake/docker): non-editable submodules in "latest" mode (reanahub#73)

ci(reana-workflow-engine-snakemake/release-please): initial configuration (reanahub#74)

ci(reana-workflow-engine-snakemake/commitlint): addition of commit message linter (reanahub#74)
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@tiborsimko @dinosk @jirikuncar @diegodelemos