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sage.combinat.finite_state_machine: Deprecate is_... functions #12834

sage.combinat.finite_state_machine: Deprecate is_... functions

sage.combinat.finite_state_machine: Deprecate is_... functions #12834

Workflow file for this run

name: Build & Test
on:
pull_request:
merge_group:
push:
branches:
- master
- develop
# Ignore pushes on tags to prevent two uploads of codecov reports
tags-ignore: ['**']
workflow_dispatch:
# Allow to run manually
inputs:
platform:
description: 'Platform'
required: true
default: 'ubuntu-jammy-standard'
docker_tag:
description: 'Docker tag'
required: true
default: 'dev'
concurrency:
# Cancel previous runs of this workflow for the same branch
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
#
# The three workflows:
#
# - build.yml (with jobs test-new, test-mod, test-long),
# - doc-build.yml,
# - doc-build-pdf.yml
#
# each build Sage:
#
# - incrementally starting from a Docker image that ci-linux.yml
# publishes on each development release to ghcr.io,
# - orchestrated using a tox-generated Dockerfile,
# - using https://github.com/marketplace/actions/build-and-push-docker-images,
# - pushing the image to a local registry,
# - then executing a container loaded from that registry,
#
# and then run various tests or build the documentation.
#
# Without the use of a cache, this runs the same incremental rebuild of Sage
# multiple times; there is no interaction between these workflow and jobs.
#
# This baseline is transparently improved by our use of the GH Actions cache,
# see https://docs.docker.com/build/ci/github-actions/cache/#cache-backend-api.
#
# Jobs test-mod and test-long are only started after test-new completed;
# but the workflows doc-build.yml and doc-build-pdf.yml are started independently.
#
# - When nothing is cached and the 3 workflows are launched in parallel,
# they may each run the same incremental rebuild.
#
# - When there's congestion that leads to the workflows to be run serially,
# the 2nd and 3rd workflow will be able to use the cache from the 1st workflow.
#
# This elasticity may be helpful in reducing congestion.
#
# There is a rather small per-project limit of 10 GB for this cache.
# Use https://github.com/sagemath/sage/actions/caches to monitor the utilization
# of the cache.
#
env:
# Adapted from docker.yml
TOX_ENV: "docker-${{ github.event.inputs.platform || 'ubuntu-jammy-standard' }}-incremental"
BUILD_IMAGE: "localhost:5000/${{ github.repository }}/sage-${{ github.event.inputs.platform || 'ubuntu-jammy-standard' }}-with-targets:ci"
FROM_DOCKER_REPOSITORY: "ghcr.io/sagemath/sage/"
FROM_DOCKER_TARGET: "with-targets"
FROM_DOCKER_TAG: ${{ github.event.inputs.docker_tag || 'dev'}}
EXTRA_CONFIGURE_ARGS: --enable-fat-binary
jobs:
test-new:
runs-on: ubuntu-latest
services:
# https://docs.docker.com/build/ci/github-actions/local-registry/
registry:
image: registry:2
ports:
- 5000:5000
steps:
- name: Maximize build disk space
uses: easimon/maximize-build-space@v10
with:
# need space in /var for Docker images
root-reserve-mb: 30000
remove-dotnet: true
remove-android: true
remove-haskell: true
remove-codeql: true
remove-docker-images: true
- name: Checkout
id: checkout
uses: actions/checkout@v4
- name: Install test prerequisites
# From docker.yml
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Merge CI fixes from sagemath/sage
# From docker.yml
# This step needs to happen after the commit sha is put in DOCKER_TAG
# so that multi-stage builds can work correctly.
run: |
mkdir -p upstream
.ci/merge-fixes.sh 2>&1 | tee upstream/ci_fixes.log
env:
GH_TOKEN: ${{ github.token }}
SAGE_CI_FIXES_FROM_REPOSITORIES: ${{ vars.SAGE_CI_FIXES_FROM_REPOSITORIES }}
# Building
- name: Generate Dockerfile
# From docker.yml
run: |
tox -e ${{ env.TOX_ENV }}
cp .tox/${{ env.TOX_ENV }}/Dockerfile .
env:
# Only generate the Dockerfile, do not run 'docker build' here
DOCKER_TARGETS: ""
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
with:
driver-opts: network=host
- name: Build Docker image
id: image
uses: docker/build-push-action@v5
with:
# push and load may not be set together at the moment
#
# We are using "push" (to the local registry) because it was
# more reliable than "load", for which we observed random failure
# conditions in which the built image could not be found.
#
push: true
load: false
context: .
tags: ${{ env.BUILD_IMAGE }}
target: with-targets
cache-from: type=gha
cache-to: type=gha,mode=max
build-args: |
NUMPROC=6
USE_MAKEFLAGS=-k V=0 SAGE_NUM_THREADS=4 --output-sync=recurse
TARGETS_PRE=build/make/Makefile
TARGETS=ci-build-with-fallback
- name: Start container
run: |
docker run --name BUILD -dit \
--mount type=bind,src=$(pwd),dst=$(pwd) \
--workdir $(pwd) \
${{ env.BUILD_IMAGE }} /bin/sh
# Testing
- name: Check that all modules can be imported
run: |
# Increase the length of the lines in the "short summary"
export COLUMNS=120
# The following command checks that all modules can be imported.
# The output also includes a long list of modules together with the number of tests in each module.
# This can be ignored.
./sage -python -m pip install pytest-xdist
./sage -python -m pytest -c tox.ini -qq --doctest --collect-only || true
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
- name: Test changed files (sage -t --new)
run: |
export MAKE="make -j2 --output-sync=recurse" SAGE_NUM_THREADS=4
# We run tests with "sage -t --new"; this only tests the uncommitted changes.
./sage -t --new -p4
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
test-mod:
runs-on: ubuntu-latest
needs: [test-new]
services:
# https://docs.docker.com/build/ci/github-actions/local-registry/
registry:
image: registry:2
ports:
- 5000:5000
strategy:
fail-fast: false
matrix:
targets:
- sagemath_categories-check
steps:
- name: Maximize build disk space
uses: easimon/maximize-build-space@v10
with:
# need space in /var for Docker images
root-reserve-mb: 30000
remove-dotnet: true
remove-android: true
remove-haskell: true
remove-codeql: true
remove-docker-images: true
- name: Checkout
id: checkout
uses: actions/checkout@v4
- name: Install test prerequisites
# From docker.yml
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Merge CI fixes from sagemath/sage
# From docker.yml
# This step needs to happen after the commit sha is put in DOCKER_TAG
# so that multi-stage builds can work correctly.
run: |
.ci/merge-fixes.sh
env:
GH_TOKEN: ${{ github.token }}
# Building
- name: Generate Dockerfile
# From docker.yml
run: |
tox -e ${{ env.TOX_ENV }}
cp .tox/${{ env.TOX_ENV }}/Dockerfile .
env:
# Only generate the Dockerfile, do not run 'docker build' here
DOCKER_TARGETS: ""
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
with:
driver-opts: network=host
- name: Build Docker image
id: image
uses: docker/build-push-action@v5
with:
push: true
load: false
context: .
tags: ${{ env.BUILD_IMAGE }}
target: with-targets
cache-from: type=gha
cache-to: type=gha,mode=max
build-args: |
NUMPROC=6
USE_MAKEFLAGS=-k V=0 SAGE_NUM_THREADS=4 --output-sync=recurse
TARGETS_PRE=build/make/Makefile
TARGETS=ci-build-with-fallback
- name: Start container
run: |
docker run --name BUILD -dit \
--mount type=bind,src=$(pwd),dst=$(pwd) \
--workdir $(pwd) \
${{ env.BUILD_IMAGE }} /bin/sh
# Testing
- name: Test modularized distributions
run: |
export MAKE="make -j2 --output-sync=recurse" SAGE_NUM_THREADS=4
make V=0 tox-ensure && make ${{ matrix.targets }}
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
test-long:
runs-on: ubuntu-latest
needs: [test-new]
services:
# https://docs.docker.com/build/ci/github-actions/local-registry/
registry:
image: registry:2
ports:
- 5000:5000
steps:
- name: Maximize build disk space
uses: easimon/maximize-build-space@v10
with:
# need space in /var for Docker images
root-reserve-mb: 30000
remove-dotnet: true
remove-android: true
remove-haskell: true
remove-codeql: true
remove-docker-images: true
- name: Checkout
id: checkout
uses: actions/checkout@v4
- name: Install test prerequisites
# From docker.yml
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Merge CI fixes from sagemath/sage
# From docker.yml
# This step needs to happen after the commit sha is put in DOCKER_TAG
# so that multi-stage builds can work correctly.
run: |
.ci/merge-fixes.sh
env:
GH_TOKEN: ${{ github.token }}
# Building
- name: Generate Dockerfile
# From docker.yml
run: |
tox -e ${{ env.TOX_ENV }}
cp .tox/${{ env.TOX_ENV }}/Dockerfile .
env:
# Only generate the Dockerfile, do not run 'docker build' here
DOCKER_TARGETS: ""
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
with:
driver-opts: network=host
- name: Build Docker image
id: image
uses: docker/build-push-action@v5
with:
push: true
load: false
context: .
tags: ${{ env.BUILD_IMAGE }}
target: with-targets
cache-from: type=gha
cache-to: type=gha,mode=max
build-args: |
NUMPROC=6
USE_MAKEFLAGS=-k V=0 SAGE_NUM_THREADS=4 --output-sync=recurse
TARGETS_PRE=build/make/Makefile
TARGETS=ci-build-with-fallback
- name: Start container
id: container
run: |
docker run --name BUILD -dit \
--mount type=bind,src=$(pwd),dst=$(pwd) \
--workdir $(pwd) \
${{ env.BUILD_IMAGE }} /bin/sh
# Testing
- name: Test all files (sage -t --all --long)
run: |
./sage -python -m pip install coverage
./sage -python -m coverage run --rcfile=src/tox.ini src/bin/sage-runtests --all --long -p4 --format github --random-seed=286735480429121101562228604801325644303
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
- name: Copy coverage results
if: (success() || failure()) && steps.container.outcome == 'success'
run: |
./sage -python -m coverage combine --rcfile=src/tox.ini
./sage -python -m coverage xml --rcfile=src/tox.ini
mkdir -p coverage-report
mv coverage.xml coverage-report/
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
- name: Upload coverage to codecov
if: (success() || failure()) && steps.container.outcome == 'success'
uses: codecov/codecov-action@v4
with:
directory: ./coverage-report