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v1.3.0 - Halloween Gourd

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@muffato muffato released this 11 Nov 15:44
debb247

Enhancements & fixes

  • New --window_size parameter to select the size of the windows to compute statistics on.
    It replaces the --window_size_info parameter, which only affected output naming.
  • Renamed --selected_fw_output to to --selected_fasta_windows_outputs for clarity,
    which now has better validation.
  • Upgraded to the nf-core template v4.2.0
  • Slack / Teams functionality now moved to Nextflow plugins (nf-slack, nf-teams)
  • Adjusted the resource limits of bgzip, tabix, and fastawindows to accommodate a wide range
    of genome size, up to 95 Gbp.

Parameters

Old parameter New parameter
--window_size_info --window_size
--selected_fw_output --selected_fasta_windows_outputs

NB: Parameter has been updated if both old and new parameter information is present.
NB: Parameter has been added if just the new parameter information is present.
NB: Parameter has been removed if new parameter information isn't present.