TaxonKit v0.2.4

@shenwei356 shenwei356 released this Jan 30, 2018 · 3 commits to master since this release

Changelog

  • taxonkit reformat:
    • more accurate result when using flag -F/--fill-miss-rank to estimate and fill missing rank with original lineage information
    • supporting escape strings like \t, \n, #5
    • outputting corresponding taxids for reformated lineage. #8
  • taxonkit lineage:
    • fix bug for taxid 1 #7
    • add flag -d/--delimiter.

TaxonKit v0.1.8

@shenwei356 shenwei356 released this Apr 27, 2017 · 22 commits to master since this release

Changelog

  • taxonkit lineage, add an extra column of lineage in Taxid.
    #3. e.g.,

      349741  cellular organisms;Bacteria;PVC group;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;Akkermansiaceae;Akkermansia;Akkermansia muciniphila;Akkermansia muciniphila ATCC BAA-835  131567;2;1783257;74201;203494;48461;1647988;239934;239935;349741
    
  • fix colorful output in windows.

TaxonKit v0.1.8-dev

@shenwei356 shenwei356 released this Apr 25, 2017 · 23 commits to master since this release

Changelog

  • taxonkit lineage, add an extra column of lineage in Taxid. #3 e.g.,

      349741  cellular organisms;Bacteria;PVC group;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;Akkermansiaceae;Akkermansia;Akkermansia muciniphila;Akkermansia muciniphila ATCC BAA-835  131567;2;1783257;74201;203494;48461;1647988;239934;239935;349741