SimSpliceEvol: Alternative splicing-aware simulation of biological sequence evolution
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Updated
Jun 21, 2024 - Python
SimSpliceEvol: Alternative splicing-aware simulation of biological sequence evolution
BRIE: Bayesian Regression for Isoform Estimate in Single Cells
Use Thor's Axe to cut exons into their evolutionary building blocks ⚡
Repository for method to analyse the relationship between germline variants and somatic mutations and alternative splicing in breast cancer patients based on RNA-Seq data,
A network-based approach for exon set enrichment
Algorithm to infer clusters of isoorthologous transcripts using gene-level homology relationships and a Reciprocal Best Hits approach
Snakemake pipeline for alternative slicing analysis with VAST-TOOLS
This study is using scRNA-seq to study the expression and regulation of alternative splicing (AS) events in single cells
Spicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data
Depository for Bioinformatics Master Project HT2022-VT2023
ISOform-guided prediction of epiTOPEs in cancer
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
A tool to model the evolution and structural impact of alternative splicing
Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
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