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atac-seq

Here are 5 public repositories matching this topic...

Pipelines-jusuE404 / ATAC_

Updated Aug 4, 2014
Perl

praneet1988 / Computational-Suite-For-Bioinformaticians-and-Biologists

Computational Suite For Bioinformaticians and Biologists (CSBB) provides 18 modules focused on analytical tasks like performing upper-quantile normalization, interactive visualization and next generation sequencing pipelines. CSBB now also has capability to process public data. Providing User with End to End pipeline experience

processing statistics ngs chip-seq atac-seq rna-seq-analysis differential-expression normalization ngs-analysis ngs-pipeline publicdata visulaization

Updated Sep 26, 2019
Perl

dgavr / biotagging

Python scripts necessary to reproduce ATAC-seq and RNA-seq analysis in Biotagging manuscript

rnaseq atac-seq biotagging strand-splitting tsslab

Updated Nov 9, 2018
Perl

csbbcompbio / CSBB-v3.0

CSBB - Computational Suite For Bioinformaticians and Biologists

rna-seq statistics correlation heatmap pipelines pca scatter-plot chip-seq atac-seq differential-expression protein-protein-interaction normalization linegraph ngs-pipeline publicdata nmf-decomposition

Updated May 22, 2018
Perl

HuntsmanCancerInstitute / MultiRepMacsChIPSeq

Multiple-replica multiple-condition Macs2 ChIPSeq wrapper

chip-seq atac-seq chromatin macs2 peak-calling

Updated Nov 1, 2024
Perl

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