Phigaro is a scalable command-line tool for predicting phages and prophages

Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.

A set of tools for the biologists who sequence RNA or watch cells in the Thomson Lab

⚡ A complete responsive website for comprehensive database of allergens with additional features and functionalities like searching, sorting and downloading the data to make it easy to read, access, analyze and further use the data.

A repository for all code and data associated with "Predicting the In-Between: Present and Future Habitat Suitability of an Intertidal Euryhaline Fish".

Modelling and Optimization of Models with a focus on Healthcare and Biological Networks

BIAP - A website that serves as a tool to analyze biological data (nucleotide and aminoacid sequences) and provide biology-related information in one place.

JSON API documentation static site

Perform a de-novo assembly of an unknown organism and report workflows and findings. Illumina PE 101x2, insert size 350bps +/- 50, PacBio long reads. Develop a Java program with a GUI to vizualise and report quality metrics for the best three assembly attempts.

FUSE toolkit supports fluorescent cell image alignment and analysis.

The course project of BIO-369@EPFL, 2024 Spring