A Jupyter notebook to identify collective cell signalling in raw microscopy images

Repository of Jupyter Notebooks created by the Bio2Byte group

The Plant-Image-Batch-ID is a Python-based Jupyter Notebook designed for automated plant identification from a directory of images that utilizes the PlantNet API.

Notebooks used by https://locusofctrl.github.io

Jupyter notebook of alternative functions for nucleotide string analysis and plotting

Synthetic Biology jupyter notebooks that streamline and guide the genetic experimentation and the design process

Pereira, Humberto, Flávio Azevedo, Lucília Domingues, and Björn Johansson. 2022. “Expression of Yarrowia Lipolytica Acetyl-CoA Carboxylase in Saccharomyces Cerevisiae and Its Effect on in-Vivo Accumulation of Malonyl-CoA.” *Computational and Structural Biotechnology Journal* 20 (January 1): 779–787.

A toy example in a google colab notebook that models how a simple biological body plan could be stored in object-oriented morphogenetic code.

Notebook for Honours project: Oral Campylobacter spp. and periodontal disease

An educational Jupyter notebook for learning Interaction Analysis