A full-text article retrieval pipeline for biomedical literature.
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Updated
Nov 4, 2024 - Python
A full-text article retrieval pipeline for biomedical literature.
A Causal Relation Schema for Text
GePI (GEne - Protein Interactions) is a web portal for quick and convenient access to gene - protein interaction mentions automatically extracted from the biomedical literature, i.e. PubMed and PubMed Central (Open Access Subset).
AIObioEnts, and all-in-one biomedical named-entity recognition following the all-in-one NER scheme
An Improved Method for Phenotype Concept Recognition Using Rich HPO Information
Estudio del carácter patogénico de variantes humanas mediante deep learning. Fine-tuning de BERT para la representación de enfermedades: un método de aprendizaje sobre datasets de textos biomédicos.
datasets for tissue and tool named entity recognition, annotation files for biological workflow extraction, and disambiguation files
🪄📄 TOPICAL: TOPIC pages AutomagicaLly
Corpus of Online Medical EnTities: the cometA corpus
A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.
Binary classifier to identify scientific publications reporting pharmacokinetic parameters estimated in vivo
BioNLP Workshop 2023 and Shared Tasks @ ACL 2023
Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems
BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences
[BioCreative VII] Track 5 - LitCovid track Multi-label topic classification for COVID-19 literature annotation
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