CMSC737 - Assembly Model Testing
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Updated
Mar 12, 2014 - Python
CMSC737 - Assembly Model Testing
Bioinformatics problems and solutions
geneSpark is a bioinformatics software program written in Python and Apache Spark for big data epigenetic histone modification ChIP-seq analysis.
Alinhamento de sequencias,algoritmos de alinhamento global e semi-global, Biologia computacional.
miRNA-UTR approximate matching algorithms in R/Python/Bash
Mutual information between continuous variables in Python
A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed by graph theoretic constraint counting on the covalent and noncovalent bond network. Raschka et al. (2016) Proteins: Structure, Function, and Bioinformatics
Learning python in a Computational Methods of Biology class
Computational Biology Labs Code
Predicting Transcription Factor Binding Sites from ENCODE data using Machine Learning
Analytic/Visual Tool For Evolutionary Diversity Across Genomes. Now lives at https://github.com/chilleo/ALPHA.
Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on Computational Biology
AI assembly of bioNLP wordnets
Solutions to Rosalind's problems
Classify transcriptional factor motifs into true motifs and false motifs
Smart search engine for all bioinformatics databases worldwide
Improvement and Implementation of Paper 'Identification of ATP binding residues of a protein from its primary sequence'
Intl. Computational Biology & Bioinformatics conferences on the CLI
Computational Biology Assignments
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