R package for pre-processing of mass and flow cytometry data
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Updated
Sep 6, 2022 - R
R package for pre-processing of mass and flow cytometry data
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
Popcycle is an R package that offers reproducible analytical tools to analyze flow cytometry data collected by SeaFlow
An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader data, and removing debris and doublets and calibration of flow cytometry data.
Immunology Informatics - Big Data Analysis in Immunology - Tutorials
R package offering functionality for the advanced analysis of microbial flow cytometry data
CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq
R package for analysis of single-cell data using graphs
cytoDiv is a R function that calculates ecological diversity indices for a microbial community based on its bio-optical properties measured at the single cell level by flow cytometry. The indices express the organization and structure of a community, its richness in physiological and genetic variations. The equations used to calculate the indice…
R package to cluster single-cell data and generate features that can be used for model building
Shiny Modules for visualizing flow cytometry data
Basic functionality to create circos plot that shows concurrent positivity of flow cytometry markers.
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
R package for interactive visualization and analysis of single-cell data
Tools for Imaging Flow Cytometry
Bayesian models used in CD56bright natural killer cells preferentially kill proliferating CD4+ T cells
Plots the NRS (non-redundancy score) of selected markers from one or more FCS files
An R package for simple, customizable binning of flow cytometric data
Conversion from light scattering measured by SeaFlow to carbon per cell
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