H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
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Updated
Oct 28, 2020 - Python
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
SMETANA: a tool to analyse interactions in microbial communities
mergem is a python package and command-line tool for merging, comparing, and translating genome-scale metabolic models
Designing microbial communities
Trim, extract, and convert GEMs
Collection of scripts to collect data from databases such as BRENDA, BiGG, and the chemical translation service, and update a model of CHO-K1 growth.
Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3
CBMPy Metadraft: a flexible and extensible genome-scale model reconstruction tool
iPfal17 genome-scale metabolic reconstruction; lipid metabolism curation
A metabolic modeling workflow for communities of organisms in an nasal medium.
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