Implementation of TASEP with reinitiation and particles of arbitrary size.
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Updated
Apr 18, 2016 - C++
Implementation of TASEP with reinitiation and particles of arbitrary size.
Network approach to simulate epidemic infection in a bus - station system
A simulation of the propagation of a virus using the Gillespie algorithm
Efficient discrete random distribution for C++. The implementation uses array-based sum tree to allow fast sampling and updates of weighted events.
🌲 a flexible gene expression simulator with codon-specific translation rates
Stochastic chemical kinetics using Gillespie algorithm and chemical master equation, application to enzyme kinetics
Stochastic simulation of CRISPR nucleases cleaving a pool of DNA or RNA
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