Flexible Algorithms for Image Registration

MATLAB Elastix wrapper

AL-DIC(Augmented Lagrangian DIC) is a fast, parallel-computing DIC algorithm, which combines advantages of Local Subset DIC (fast, compute in parallel) and Global DIC (guarantee kinematic compatibility).

Fourier analysis applications for image matching.

Repository for exercises and project in Image Processing and Computer Vision course at University of Twente

Group-wise diffeomorphic registration and segmentation of medical images.

Gaussian Field Estimator with Manifold Regularization for Retinal Image Registration

Multimodal image image registration main functions such as mutual information (MI), histogram segmentation, rigid transformation, and RMSE

Deformable Groupwise Image Registration using Low-Rank and Sparse Decomposition

The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.

Through MATLAB Computer Vision and Image Processing | Mathworks

This repo contains MATLAB code for two stage multimodal (multispectral) registration. Stage I registration is based on pinhole camera model, relative orientation of two cameras or epipolar geometry. 2nd stage registration uses multimodel matching metrics (MMI & NCCR) to estimate the misregistration effect which is further used to estimate a leas…

Master's thesis 'Low rank- and sparsity-based image registration'

All codes written by me in my Digital Image Processing & Analysis course.

SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

Includes the work done within the course Image Analysis, which covers the following topics: SIFT Descriptor, Learning and Convolutional Neural Networks, Image Registration, Triangulation and Digit Recognition in Scale Space.

Perform registration of 3D imaging data and localization of spots (synapses/boutons) in semi-automatic mode (with graphical user interface).

Retina Imaging Toolbox (RIT)

The Information & Mutual Information Ratio For Counting Image Local Features and Their Matches

A MATLAB implementation of Progressive Sparse Spatial Consensus (PSSC) for image feature matching