Morphometric analysis of neuromuscular junction microscopy images, and protein distribution and localisation analysis of immunohistochemically-labelled microscopy images.
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Updated
May 16, 2023 - MATLAB
ImageJ is an open source Java image processing program inspired by NIH Image.
It runs on any computer with a Java 1.8 or later virtual machine.
Downloadable distributions are available for Windows, Mac OS X and Linux.
ImageJ has a strong, established user base, with thousands of plugins and macros for performing a wide variety of tasks.
Fiji is a "batteries-included" distribution of ImageJ, bundling many plugins which facilitate scientific image analysis.
Morphometric analysis of neuromuscular junction microscopy images, and protein distribution and localisation analysis of immunohistochemically-labelled microscopy images.
Protocol for plotting calibration curves and beam profiles from film with MATLAB & ImageJ
This Matlab code helps work out what the required parameters are for keeping your scalebars consistent. Designed originally for general tif files and for Zeiss CrossBeam.
R interface to ImageJ
Assuming you have communication between ImageJ and MATLAB via ImageJ-MATLAB, copytoImagePlus allows you to turn a MATLAB array into ImagePlus object.
a wrapper of net.imagej.matlab.ImageJMATLABCommands.show() to support opening a MATLAB array as 5D hyperstack in ImageJ
Create and manipulate digital skeletons