This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
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Updated
Jun 4, 2024 - R
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
Infer metabolic directions from moment differences of mass-weighted intensity distributions
Low level infrastructure to handle MS spectra
Galaxy tools for metabolomics maintained by Workflow4Metabolomics
Retip - Retention Time prediction for metabolomics
Creating and using (chemical) compound databases
Chemical Similarity Enrichment analysis of metabolomics datasets
metaX: a flexible and comprehensive software for processing omics data.
Core Utils for Mass Spectrometry Data
High level functionality to support and simplify metabolomics data annotation.
R Interface to the ClassyFire REST API
Compare different differential abundance and expression methods
Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles
KPIC2: An Effective Framework for Mass Spectrometry-Based Metabolomics Using Pure Ion Chromatograms
RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
Targeted pipeline to quantify metabolomics datasets produced by QExactive and Triple Quadrupole Mass Specs.
Quantitative features for mass spectrometry data
geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
Galaxy tools for msPurity package: includes precursor ion purity calculations and spectral matching
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