Implementation of a comparative analysis to find the best ML model for classifying dry eye disease from healthy controls using metabolomics datasets.
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Updated
May 31, 2024 - Jupyter Notebook
Implementation of a comparative analysis to find the best ML model for classifying dry eye disease from healthy controls using metabolomics datasets.
Maven GUI: Metabolomics Analysis and Visualization Engine
Calculation and visualization of molecular networks based on t-SNE algorithm
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
GPU accelerated MatchMS
Metabolic state prediction at single-cell resolution is a project developed as a Bachelor's Thesis (TFG), to recover metabolic states from single-cell expression data.
The Ontology for Nutritional Studies (ONS) has been developed as part of the ENPADASI European project (http://www.enpadasi.eu/) with the aim to define a common language and building ontologies for nutritional studies.
Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
National Microbiome Data Collaborative (NMDC) unified data model
RTMet is a data workflow to process FIA-MS data coming from a bioreactor, find metabolites and fluxes, and send a feedback command to the system.
Reproducilble Metabolomics Workflow
Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
S4 generic functions for Bioconductor mass spectrometry infrastructure
Repository for the MetaBridge Shiny app.
The codebase of the OpenMS project
Data analysis for colorectal cancer projects, mainly using metabolomics data.
Repository for metabolomics and lipidomics data processing app.
Nara Marella
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