metagenomics
Here are 13 public repositories matching this topic...
GETS: a Genomic Tree based Sparse solver. This package accompanies an article to be published in the forthcoming Birkhäuser-ANHA book "Explorations in the Mathematics of Data Science" --- "A genomic tree based sparse solver" by Timothy A. Davis and Srinivas Subramanian.
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Jan 27, 2024 - C
A C and Python implementation of latent strain analysis for eigengenome partitioning.
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Mar 11, 2017 - C
tools collection of Sipros for stable isotopic mass spectrum meta proteomic research
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Mar 21, 2023 - C
Software for monitoring metagenomes using nanopore sequencing reads
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Feb 14, 2024 - C
MetaCC allows scalable and integrative analyses of both long-read and short-read metagenomic Hi-C data
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May 31, 2024 - C
Scalable high-throughput short-read open reading frame prediction
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Aug 24, 2021 - C
A tool to infer metagenomic sample composition
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Oct 10, 2023 - C
sensitive and precise assembly of short sequencing reads
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Apr 16, 2024 - C
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
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May 30, 2024 - C
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
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Mar 3, 2024 - C
A complete pipeline for metagenomic analysis
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Jun 4, 2024 - C
MMseqs2: ultra fast and sensitive search and clustering suite
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May 23, 2024 - C
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