extract experimental metadata from GEO xml files
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Updated
Dec 8, 2023 - Python
extract experimental metadata from GEO xml files
Tuberculosis@LOG and NPR, Macrophage gene expression time series.
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Python tool to merge cross-species Illumina iScan genotype data with a reference set of genotypes from a pre-existing source.
CGI server for searching and visualizing array database
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
SparkRMA: Robust Multi-array Average (RMA) In Apache Spark
bioTEA - A user friendly tool to perform transcript expression analysis
A toolkit for navigating and analyzing gene expression datasets
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UNet 2.0 - Pytorch implementation of the U-Net 2.0 for image semantic segmentation, with processing blocks for noisy images
Bioinformatics course project - Fall 2020, analysis of genetic expression omnibus (GEO) data series of Acute Myeloid Leukemia
analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GEO)
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