microbiome analysis of ant colonies
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Updated
May 4, 2018 - Shell
microbiome analysis of ant colonies
Docker RStudio container for Duke University IBIEM 2017 - Integrative Bioinformatics for Investigating & Engineering Microbiomes
microbiome analysis of ant colonies
16S Microbiome Analysis Pipeline. This version written in Nextflow.
Extract and compare variable regions from hCom genomes.
Codes for the statistical analysis that investigates the impact of high-fat diet on gut microbiome and serotonergic gene expression in the raphe nuclei.
This pipeline is intended to be a convenient way to work though large sets of metagenomic or metatranscriptiomic datasets while also retaining high analytical flexibility due to retained intermediate results that might be useful outside of the intended purpose.
Bash scripts for running QIIME 1.9 and a Snakemake workflow to automate it using singularity container images.
This repository provides scripts for the 16S microbiome analysis and metagenome prediction using linux and R-Studio
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
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